myDGR

myDGR report for SRS043411_WUGC_scaffold_28831

Seq: SRS043411_WUGC_scaffold_28831 (52918 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 1-24183 bp 2 Locus 2: 40348-52916 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 1-1137 bp Feature: CDS Location: 1222-2412 bp Feature: CDS Location: 2443-3096 bp Feature: CDS Location: 3324-4199 bp Feature: CDS Location: 4336-6213 bp Feature: CDS Location: 6756-7826 bp Feature: CDS Location: 8008-8382 bp Feature: CDS Location: 8409-9893 bp Feature: CDS Location: 9957-10283 bp Feature: CDS Location: 10298-10606 bp Feature: RT Des: DGR reverse transcriptase Location: 10711-11925 bp Feature: accessory Des: Avd_like Location: 12273-12659 bp Feature: target Des: target gene diversified by DGR Location: 12840-13919 bp Feature: CDS Location: 13937-14314 bp Feature: CDS Location: 14330-14782 bp Feature: CDS Location: 14802-15113 bp Feature: CDS Location: 15141-15323 bp Feature: CDS Location: 15313-16131 bp Feature: CDS Location: 16124-17272 bp Feature: CDS Location: 17265-17579 bp Feature: CDS Location: 17592-17984 bp Feature: CDS Location: 17996-18958 bp Feature: CDS Location: 18971-20347 bp Feature: CDS Location: 20340-20552 bp Feature: CDS Location: 20566-24183 bp Feature: CDS Location: 40348-40545 bp Feature: CDS Location: 40676-41119 bp Feature: CDS Location: 41240-41689 bp Feature: CDS Location: 41946-42962 bp Feature: CDS Location: 43077-43412 bp Feature: CDS Location: 43713-44054 bp Feature: CDS Location: 44026-44286 bp Feature: CDS Location: 44289-44546 bp Feature: CDS Location: 44543-44740 bp Feature: CDS Location: 44779-45096 bp Feature: CDS Location: 45304-45801 bp Feature: CDS Location: 45812-46393 bp Feature: CDS Location: 46438-46653 bp Feature: CDS Location: 46658-47155 bp Feature: CDS Location: 47152-47718 bp Feature: CDS Location: 47721-47996 bp Feature: CDS Location: 48014-48874 bp Feature: CDS Location: 49220-49822 bp Feature: CDS Location: 49809-50474 bp Feature: CDS Location: 50488-50622 bp Feature: target Des: target gene diversified by DGR Location: 50683-51861 bp Feature: CDS Location: 51867-52409 bp Feature: CDS Location: 52428-52916 bp Sorry, your browser does not support inline SVG.