myDGR

myDGR report for SRS055982_Baylor_scaffold_3508

Seq: SRS055982_Baylor_scaffold_3508 (42847 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3-15811 bp 2 Locus 2: 22760-42846 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 3-533 bp Feature: CDS Location: 695-853 bp Feature: CDS Location: 1069-1587 bp Feature: CDS Location: 1641-2072 bp Feature: CDS Location: 2119-2595 bp Feature: CDS Location: 2619-2879 bp Feature: RT Des: DGR reverse transcriptase Location: 2857-4254 bp Feature: accessory Des: AVD Location: 4305-4700 bp Feature: target Des: target gene diversified by DGR Location: 4772-6118 bp Feature: CDS Location: 6131-7192 bp Feature: CDS Location: 7195-7644 bp Feature: CDS Location: 7682-8863 bp Feature: CDS Location: 8870-9640 bp Feature: CDS Location: 9647-10267 bp Feature: CDS Location: 10289-11371 bp Feature: CDS Location: 11393-12625 bp Feature: CDS Location: 12708-12947 bp Feature: CDS Location: 12950-15811 bp Feature: CDS Location: 22760-23611 bp Feature: CDS Location: 23601-24533 bp Feature: CDS Location: 24684-25160 bp Feature: CDS Location: 25185-25565 bp Feature: CDS Location: 25568-26053 bp Feature: CDS Location: 26050-26547 bp Feature: CDS Location: 26550-27098 bp Feature: CDS Location: 27354-27692 bp Feature: CDS Location: 27689-28039 bp Feature: CDS Location: 28054-29106 bp Feature: CDS Location: 29125-29874 bp Feature: CDS Location: 29879-30862 bp Feature: CDS Location: 30865-31134 bp Feature: CDS Location: 31139-33208 bp Feature: CDS Location: 33238-33399 bp Feature: CDS Location: 33402-33620 bp Feature: CDS Location: 33709-34023 bp Feature: CDS Location: 34025-34231 bp Feature: target Des: target gene diversified by DGR Location: 34298-34756 bp Feature: CDS Location: 34799-35089 bp Feature: CDS Location: 35221-35874 bp Feature: CDS Location: 35856-36425 bp Feature: CDS Location: 36438-37526 bp Feature: CDS Location: 37530-37769 bp Feature: CDS Location: 37899-38291 bp Feature: CDS Location: 38340-38498 bp Feature: CDS Location: 38566-39948 bp Feature: CDS Location: 39932-40135 bp Feature: CDS Location: 40405-41976 bp Feature: CDS Location: 42520-42846 bp Sorry, your browser does not support inline SVG.