myRT


Click here to see the genomic neighborhood information for this class (for non-redundant RTs (Similarity < 90%))

Putative CRISPR-other RTs in complete Genomes

IndexRTmyRTGenomic Neighborhood
1FR821777.2_72125_73651_+ myRT results cas_csm6,Cas6-I-III,RVT-AbiP2
2CP006943.1_1498646_1499863_- myRT results cas1_DVULG,RVT-AbiP2,cas4,Cas7_I-C
3CP023429.1_2061924_2063411_- myRT results CRISPR_Cas2,cas1_DVULG,RVT-AbiP2,cas4
4CP025023.1_47327_48853_+ myRT results cas_csm6,Cas6-I-III,RVT-AbiP2
5CP023076.1_47327_48853_+ myRT results cas_csm6,Cas6-I-III,RVT-AbiP2
6AP018562.1_47586_49112_+ myRT results cas_csm6,Cas6-I-III,RVT-AbiP2
7AP020315.1_1948965_1950491_- myRT results RVT-AbiP2,Cas6-I-III,cas_csm6
8CP055302.1_1751116_1752594_+ myRT results cas_Csd2,cas4,RVT-AbiP2,cas1_DVULG,Cas2_I_II_III
9CP023691.1_1528783_1530027_- myRT results AbiEii,RVT-UG23,PRK09694*2,Cas3_C,CRISPR_assoc
10CP021748.1_2942789_2944030_+ myRT results CRISPR_Cse1,PRK09694,Cas3_C,RVT-UG23/RVT-UG13/RVT-UG20/RVT-UG7,AbiEii
11CP007699.2_7613889_7615133_+ myRT results Cas5_I-E,PRK09694*2,Cas3_C,RVT-UG23/RVT-UG13/RVT-UG7/RVT-GII,AbiEii
12CP054918.1_1869673_1870911_- myRT results AbiEii,RVT-UG23/RVT-UG7/RVT-UG13/RVT-GII,PRK09694*2,Cas3_C,CRISPR_Cse1
13CP009515.1_2714070_2714552_- myRT results cas_HTH*2,Cas6b_N,Cas6b_C,RVT-CRISPR,RVT-GII,GIIM,RVT-CRISPR
14CP009515.1_2716356_2717147_- myRT results Cas6b_N,Cas6b_C,RVT-CRISPR,RVT-GII,GIIM,RVT-CRISPR
15CP012072.1_1114364_1116142_- myRT results Cas2_I_II_III,RVT-UG26/RVT-UG7/RVT-UG11,Cas1_I-II-III
16CP017006.1_6765_9521_- myRT results cas_TM1795_cmr1,Cmr3_III-B,Cas_Cmr3,Cas10_III,RVT-DGRs,Cmr6
17CP016534.2_2029608_2030492_- myRT results Cas2,RVT-G2L4,cas_Csn1
18CP003532.1_1761548_1762816_- myRT results Cas6,RVT-GII,GIIM
19CP003944.1_1025020_1026804_+ myRT results RVT_N,RVT-GII,GIIM,McrA,RVT_N,RVT-GII,GIIM,McrA,Cas10_III
20CP009515.1_2714605_2715852_- myRT results cas_HTH*2,Cas6b_N,Cas6b_C,RVT-CRISPR,RVT-GII,GIIM,RVT-CRISPR
21CP012024.1_2772858_2774120_- myRT results cas_cas6,RVT-GII,GIIM,BglB
22CP024126.1_1428236_1429909_+ myRT results Cas1_II,Csn1,CRISPR_Cas9_WED,Cas9_PI2,RVT_N,RVT-GII,GIIM,cas_Csn1,MnmE
23CP028914.1_1343033_1344844_+ myRT results AAA_21,rluA_subfam,RVT_N,RVT-GII,GIIM,HNH,Cas_csx3,TIGR03985
24CP028914.1_3772904_3774661_+ myRT results InsA,RVT_N,RVT-GII,GIIM,McrA,Cas10_III,Cmr3_III-B
25CP043056.1_5319227_5320885_+ myRT results DUF4158,DDE_Tnp_Tn3,COG5421,RVT_N,RVT-GII,GIIM,HNH,Cas2_I_II_III,cas1_CYANO
26CP043057.1_8025_9683_+ myRT results DUF4158,DDE_Tnp_Tn3,COG5421,RVT_N,RVT-GII,GIIM,HNH,Cas2_I_II_III
27CP051185.1_3745884_3747641_+ myRT results RVT_N,RVT-GII,GIIM,McrA,Cas10_III,Cmr3_III-B
28CP002691.1_7799607_7800653_+ myRT results RpoE,RVT-Retrons,cas1,DUF1016_N,YhcG_C
29CP002693.1_69205_70197_+ myRT results Cas1_I-II-III,Cas6b_N,Cas6b_C,RVT-Retrons,Cmr6_III-B
30AP014509.1_182702_183733_- myRT results RVT-Retrons,Cas2_I_II_III
31CP013355.1_579464_580516_+ myRT results Cas6b_C,RVT-Retrons,Cas1_I-II-III,Cas2_I_II_III
32CP023969.1_1797919_1799625_+ myRT results CRISPR_Cas2,RVT-Retrons
33CP029480.1_1326382_1327422_- myRT results Cas2_I_II_III,Cas1_I-II-III,RVT-Retrons,Cas6b_C,cas_TM1807_csm5
34CP035534.1_466381_466881_- myRT results Cas6_III,CRISPR_Cas6,group_II_RT_mat,RVT-UG17,PRK08506,LRR_RI
35CP031742.1_3602931_3604217_- myRT results RVT-UG23,HD_6,cas3_core,Cas3_C,CRISPR_Cse1
36CP003345.1_13871_14956_- myRT results Cas2,RVT-UG24
37CP035282.1_2041643_2042401_- myRT results cas_Csh2,Cas8a1_I-A,RVT-UG5/RVT-CRISPR/RVT-CRISPR-like,Cas_DxTHG,PRK06526
38CP054929.1_4696633_4697820_- myRT results AbiEii,RVT-UG26/RVT-UG7/RVT-CRISPR/RVT-GII,PRK09694,Cas3_C,CRISPR_Cse1