myRT

myRT report for GCA_000008005.1_ASM800v1

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Seq: AE017195.1 Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence (208369 bp)
Overview 1 RT 1: 31668-36122 bp 2 RT 2: 69590-79621 bp 3 RT 3: 84433-88624 bp 4 RT 4: 108952-113408 bp Neighborhood of RT #1 [31668, 36122] DUF3854 RVT-GII HNHc Neighborhood of RT #2 [69590, 79800] TraG-D_C Ftsk_gamma Ftsk_gamma DDE_Tnp_1 RVT_N RVT-GII GIIM nuc_hydro rpsA Neighborhood of RT #3 [84433, 88629] RVT-GII beta_clamp Neighborhood of RT #4 [108952, 113408] RVT-GII HNHc MTS Feature: gene Location: 31668-31844 bp Feature: gene Location: 31966-32889 bp Ori: AAS44883.1 Feature: domain Description: DUF3854 Location: 32506-32860 bp Feature: domain Description: DUF3854 Location: 32506-32860 bp Feature: gene Location: 32973-34856 bp Ori: AAS44884.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33294-34032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33294-34032 bp Feature: domain Description: HNHc Note: nucleases Location: 34590-34737 bp Feature: domain Description: HNHc Note: nucleases Location: 34590-34737 bp Feature: gene Location: 35133-35264 bp Feature: gene Location: 35592-36122 bp Feature: gene Location: 69590-73090 bp Ori: AAS44923.1 Feature: domain Description: TraG-D_C Location: 71207-71567 bp Feature: domain Description: TraG-D_C Location: 71 207-71 567 bp Feature: domain Description: Ftsk_gamma Location: 71975-72152 bp Feature: domain Description: Ftsk_gamma Location: 71 975-721 52 bp Feature: domain Description: Ftsk_gamma Location: 72284-72419 bp Feature: domain Description: Ftsk_gamma Location: 72284-7241 9 bp Feature: gene Location: 73262-74644 bp Ori: AAS44924.1 Feature: domain Description: DDE_Tnp_1 Location: 73628-74366 bp Feature: domain Description: DDE_Tnp_1 Location: 73628-74366 bp Feature: gene Location: 74897-76543 bp Ori: AAS44925.1 Feature: domain Description: RVT_N Location: 74939-75176 bp Feature: domain Description: RVT_N Location: 74939-751 76 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75230-75890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75230-75890 bp Feature: domain Description: GIIM Note: maturase Location: 75959-76190 bp Feature: domain Description: GIIM Note: maturase Location: 75959-761 90 bp Feature: gene Location: 77263-78213 bp Ori: AAS44926.1 Feature: domain Description: nuc_hydro Location: 77278-78184 bp Feature: domain Description: nuc_hydro Location: 77278-781 84 bp Feature: gene Location: 78817-79800 bp Ori: AAS44927.1 Feature: domain Description: rpsA Location: 79084-79621 bp Feature: domain Description: rpsA Location: 79084-79621 bp Feature: gene Location: 84433-84573 bp Feature: gene Location: 84595-84735 bp Feature: gene Location: 84933-86831 bp Ori: AAS44939.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85248-85950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85248-85950 bp Feature: gene Location: 86909-87436 bp Feature: gene Location: 87517-88629 bp Ori: AAS44941.1 Gene: dnaN Feature: domain Description: beta_clamp Location: 87520-88624 bp Feature: domain Description: beta_clamp Location: 87520-88624 bp Feature: gene Location: 108952-109089 bp Feature: gene Location: 109774-109887 bp Feature: gene Location: 109971-111899 bp Ori: AAS44970.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110292-111027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 0292-1 1 1 027 bp Feature: domain Description: HNHc Note: nucleases Location: 111618-111783 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 1 61 8-1 1 1 783 bp Feature: gene Location: 112044-113165 bp Ori: AAS44971.1 Feature: domain Description: MTS Location: 112140-112503 bp Feature: domain Description: MTS Location: 1 1 21 40-1 1 2503 bp Feature: gene Location: 113181-113408 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: AE017194.1 Bacillus cereus ATCC 10987, complete genome (5224283 bp)
Overview 1 RT 1: 3129548-3136309 bp 2 RT 2: 3436406-3447899 bp 3 RT 3: 3601318-3609075 bp Neighborhood of RT #1 [3129548, 3136314] Hydrolase_4 HTH_3 TPR TPR_12 RVT_N RVT-GII GIIM MTAN YbaK_EbsC Neighborhood of RT #2 [3436406, 3448195] B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat Neighborhood of RT #3 [3601318, 3609089] PRK00092 polC RVT-GII HNHc polC Feature: gene Location: 3129548-3130561 bp Ori: AAS42251.1 Feature: domain Description: Hydrolase_4 Location: 3129710-3130370 bp Feature: domain Description: Hydrolase_4 Location: 312 9710-3130370 bp Feature: gene Location: 3130578-3131702 bp Ori: AAS42252.1 Feature: domain Description: HTH_3 Location: 3130608-3130770 bp Feature: domain Description: HTH_3 Location: 3130608-3130770 bp Feature: domain Description: TPR Location: 3130818-3131112 bp Feature: domain Description: TPR Location: 3130818-3131112 bp Feature: domain Description: TPR_12 Location: 3131373-3131469 bp Feature: domain Description: TPR_12 Location: 3131373-3131469 bp Feature: gene Location: 3132165-3133811 bp Ori: AAS42253.1 Feature: domain Description: RVT_N Location: 3132207-3132444 bp Feature: domain Description: RVT_N Location: 3132 2 07-3132 444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3132498-3133158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3132 498-3133158 bp Feature: domain Description: GIIM Note: maturase Location: 3133227-3133458 bp Feature: domain Description: GIIM Note: maturase Location: 31332 2 7-3133458 bp Feature: gene Location: 3134514-3135185 bp Ori: AAS42254.1 Feature: domain Description: MTAN Location: 3134520-3135114 bp Feature: domain Description: MTAN Location: 313452 0-3135114 bp Feature: gene Location: 3135838-3136314 bp Ori: AAS42255.1 Feature: domain Description: YbaK_EbsC Location: 3135856-3136309 bp Feature: domain Description: YbaK_EbsC Location: 3135856-3136309 bp Feature: gene Location: 3436406-3437485 bp Feature: gene Location: 3437751-3444116 bp Ori: AAS42595.1 Feature: domain Description: B_ant_repeat Location: 3437760-3437895 bp Feature: domain Description: B_ant_repeat Location: 3437760-3437895 bp Feature: domain Description: B_ant_repeat Location: 3438135-3438288 bp Feature: domain Description: B_ant_repeat Location: 3438135-34382 88 bp Feature: domain Description: B_ant_repeat Location: 3438525-3438678 bp Feature: domain Description: B_ant_repeat Location: 343852 5-3438678 bp Feature: domain Description: B_ant_repeat Location: 3438918-3439071 bp Feature: domain Description: B_ant_repeat Location: 3438918-3439071 bp Feature: domain Description: B_ant_repeat Location: 3439314-3439470 bp Feature: domain Description: B_ant_repeat Location: 3439314-3439470 bp Feature: domain Description: B_ant_repeat Location: 3439710-3439866 bp Feature: domain Description: B_ant_repeat Location: 3439710-3439866 bp Feature: domain Description: B_ant_repeat Location: 3440106-3440262 bp Feature: domain Description: B_ant_repeat Location: 3440106-34402 62 bp Feature: domain Description: B_ant_repeat Location: 3440502-3440655 bp Feature: domain Description: B_ant_repeat Location: 3440502 -3440655 bp Feature: domain Description: B_ant_repeat Location: 3440898-3441054 bp Feature: domain Description: B_ant_repeat Location: 3440898-3441054 bp Feature: domain Description: B_ant_repeat Location: 3441294-3441450 bp Feature: domain Description: B_ant_repeat Location: 34412 94-3441450 bp Feature: domain Description: B_ant_repeat Location: 3441690-3441846 bp Feature: domain Description: B_ant_repeat Location: 3441690-3441846 bp Feature: domain Description: B_ant_repeat Location: 3442086-3442239 bp Feature: domain Description: B_ant_repeat Location: 3442 086-3442 2 39 bp Feature: domain Description: B_ant_repeat Location: 3442482-3442635 bp Feature: domain Description: B_ant_repeat Location: 3442 482 -3442 635 bp Feature: domain Description: B_ant_repeat Location: 3442878-3443034 bp Feature: domain Description: B_ant_repeat Location: 3442 878-3443034 bp Feature: domain Description: B_ant_repeat Location: 3443274-3443430 bp Feature: domain Description: B_ant_repeat Location: 34432 74-3443430 bp Feature: domain Description: B_ant_repeat Location: 3443670-3443826 bp Feature: domain Description: B_ant_repeat Location: 3443670-344382 6 bp Feature: gene Location: 3444285-3446213 bp Ori: AAS42596.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3444606-3445341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3444606-3445341 bp Feature: domain Description: HNHc Note: nucleases Location: 3445932-3446097 bp Feature: domain Description: HNHc Note: nucleases Location: 3445932 -3446097 bp Feature: gene Location: 3446297-3446410 bp Feature: gene Location: 3446906-3448195 bp Ori: AAS42598.1 Feature: domain Description: B_ant_repeat Location: 3446993-3447104 bp Feature: domain Description: B_ant_repeat Location: 3446993-3447104 bp Feature: domain Description: B_ant_repeat Location: 3447344-3447500 bp Feature: domain Description: B_ant_repeat Location: 3447344-3447500 bp Feature: domain Description: B_ant_repeat Location: 3447743-3447899 bp Feature: domain Description: B_ant_repeat Location: 3447743-3447899 bp Feature: gene Location: 3601318-3601788 bp Ori: AAS42760.1 Feature: domain Description: PRK00092 Location: 3601324-3601786 bp Feature: domain Description: PRK00092 Location: 360132 4-3601786 bp Feature: gene Location: 3602121-3603572 bp Ori: AAS42761.1 Feature: domain Description: polC Location: 3602166-3603570 bp Feature: domain Description: polC Location: 3602 166-3603570 bp Feature: gene Location: 3603634-3605448 bp Ori: AAS42762.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3603928-3604624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 360392 8-360462 4 bp Feature: domain Description: HNHc Note: nucleases Location: 3605170-3605329 bp Feature: domain Description: HNHc Note: nucleases Location: 3605170-360532 9 bp Feature: gene Location: 3605590-3605700 bp Feature: gene Location: 3606177-3609089 bp Ori: AAS42764.1 Feature: domain Description: polC Location: 3606195-3609075 bp Feature: domain Description: polC Location: 3606195-3609075 bp Sorry, your browser does not support inline SVG.
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