myRT

myRT report for GCA_001904675.1_ASM190467v1

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Seq: MRCF01000003.1 Scytonema sp. HK-05 NIES-2130_Scaffold_3, whole genome shotgun sequence (222175 bp)
Overview 1 RT 1: 29829-33311 bp 2 RT 2: 161893-172253 bp Neighborhood of RT #1 [29829, 33331] RAYT RVT-DGRs Avd_like YfmG Neighborhood of RT #2 [161893, 172447] YjbI FHA PAS GAF PRK10060 RVT-Retrons COG5635 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_PBS Peptidase_C14 Feature: gene Location: 29829-30242 bp Ori: OKH60567.1 Feature: domain Description: RAYT Location: 29862-30234 bp Feature: domain Description: RAYT Location: 29862-30234 bp Feature: gene Location: 30343-30747 bp Feature: gene Location: 30939-31997 bp Ori: OKH60569.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31146-31791 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31 1 46-31 791 bp Feature: gene Location: 31994-32338 bp Ori: OKH60570.1 Feature: domain Description: Avd_like Location: 32012-32318 bp Feature: domain Description: Avd_like Location: 3201 2-3231 8 bp Feature: gene Location: 32477-33331 bp Ori: OKH60571.1 Feature: domain Description: YfmG Location: 32516-33311 bp Feature: domain Description: YfmG Location: 3251 6-3331 1 bp Feature: gene Location: 161893-162387 bp Ori: OKH60657.1 Feature: domain Description: YjbI Location: 161983-162343 bp Feature: domain Description: YjbI Location: 1 61 983-1 62343 bp Feature: gene Location: 162555-165194 bp Ori: OKH60658.1 Feature: domain Description: FHA Location: 162567-163119 bp Feature: domain Description: FHA Location: 1 62567-1 631 1 9 bp Feature: domain Description: PAS Location: 163185-163434 bp Feature: domain Description: PAS Location: 1 631 85-1 63434 bp Feature: domain Description: GAF Location: 163443-163860 bp Feature: domain Description: GAF Location: 1 63443-1 63860 bp Feature: domain Description: PRK10060 Location: 163872-165159 bp Feature: domain Description: PRK1 0060 Location: 1 63872-1 651 59 bp Feature: gene Location: 166533-167285 bp Ori: OKH60702.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 166563-167043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 66563-1 67043 bp Feature: gene Location: 167347-171453 bp Ori: OKH60659.1 Feature: domain Description: COG5635 Location: 167854-168979 bp Feature: domain Description: COG5635 Location: 1 67854-1 68979 bp Feature: domain Description: HEAT_2 Location: 169210-169441 bp Feature: domain Description: HEAT_2 Location: 1 6921 0-1 69441 bp Feature: domain Description: HEAT_2 Location: 169702-169840 bp Feature: domain Description: HEAT_2 Location: 1 69702-1 69840 bp Feature: domain Description: HEAT_2 Location: 169879-170101 bp Feature: domain Description: HEAT_2 Location: 1 69879-1 701 01 bp Feature: domain Description: HEAT_2 Location: 170131-170374 bp Feature: domain Description: HEAT_2 Location: 1 701 31 -1 70374 bp Feature: domain Description: HEAT_2 Location: 170494-170689 bp Feature: domain Description: HEAT_2 Location: 1 70494-1 70689 bp Feature: domain Description: HEAT_2 Location: 170725-170887 bp Feature: domain Description: HEAT_2 Location: 1 70725-1 70887 bp Feature: domain Description: HEAT_2 Location: 171031-171163 bp Feature: domain Description: HEAT_2 Location: 1 71 031 -1 71 1 63 bp Feature: domain Description: HEAT_PBS Location: 171172-171247 bp Feature: domain Description: HEAT_PBS Location: 1 71 1 72-1 71 247 bp Feature: gene Location: 171482-172447 bp Ori: OKH60703.1 Feature: domain Description: Peptidase_C14 Location: 171506-172253 bp Feature: domain Description: Peptidase_C1 4 Location: 1 71 506-1 72253 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MRCF01000079.1 Scytonema sp. HK-05 NIES-2130_Scaffold_79, whole genome shotgun sequence (42139 bp)
Overview 1 RT 1: 7313-10184 bp Neighborhood of RT #1 [7313, 10184] RVT-Retrons HTH_XRE Feature: gene Location: 7313-7564 bp Feature: gene Location: 7924-8682 bp Feature: gene Location: 8705-9598 bp Ori: OKH52371.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8870-9401 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8870-9401 bp Feature: gene Location: 9585-9893 bp Ori: OKH52372.1 Feature: domain Description: HTH_XRE Location: 9597-9759 bp Feature: domain Description: HTH_XRE Location: 9597-9759 bp Feature: gene Location: 9951-10184 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MRCF01000017.1 Scytonema sp. HK-05 NIES-2130_Scaffold_17, whole genome shotgun sequence (134244 bp)
Overview 1 RT 1: 72223-75721 bp Neighborhood of RT #1 [72223, 75721] DUF2281 COG2442 RVT-GII PRK07590 Feature: gene Location: 72223-72411 bp Ori: OKH58740.1 Feature: domain Description: DUF2281 Location: 72241-72334 bp Feature: domain Description: DUF2281 Location: 72241-723 3 4 bp Feature: gene Location: 72584-72853 bp Ori: OKH58741.1 Feature: domain Description: COG2442 Location: 72602-72800 bp Feature: domain Description: COG2442 Location: 72602-72800 bp Feature: gene Location: 72932-74884 bp Ori: OKH58742.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73439-73910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 43 9-73 910 bp Feature: gene Location: 75126-75353 bp Ori: OKH58743.1 Feature: domain Description: PRK07590 Location: 75168-75342 bp Feature: domain Description: PRK07590 Location: 75168-753 42 bp Feature: gene Location: 75491-75721 bp Sorry, your browser does not support inline SVG.
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