myRT

myRT report for GCA_002368235.1_ASM236823v1

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Seq: AP018199.1 Scytonema sp. HK-05 plasmid plasmid5 DNA, complete genome (18933 bp)
Overview 1 RT 1: 7200-10131 bp Neighborhood of RT #1 [7200, 10131] RVT-Retrons HTH_XRE Feature: gene Location: 7200-7580 bp Feature: gene Location: 7940-8704 bp Feature: gene Location: 8721-9614 bp Ori: BAY50658.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8886-9417 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8886-941 7 bp Feature: gene Location: 9601-9909 bp Ori: BAY50659.1 Feature: domain Description: HTH_XRE Location: 9613-9775 bp Feature: domain Description: HTH_XRE Location: 961 3-9775 bp Feature: gene Location: 9967-10131 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: AP018194.1 Scytonema sp. HK-05 DNA, nearly complete genome (8819141 bp)
Overview 1 RT 1: 1156227-1159725 bp 2 RT 2: 4115426-4118908 bp 3 RT 3: 4247490-4257850 bp Neighborhood of RT #1 [1156227, 1159725] DUF2281 COG2442 RVT-GII PRK07590 Neighborhood of RT #2 [4115426, 4118928] RAYT RVT-DGRs Avd_like YfmG Neighborhood of RT #3 [4247490, 4258044] YjbI FHA PAS GAF PRK10060 RVT-Retrons RVT-Retrons COG5635 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_PBS Peptidase_C14 Feature: gene Location: 1156227-1156478 bp Ori: BAY43412.1 Feature: domain Description: DUF2281 Location: 1156308-1156401 bp Feature: domain Description: DUF2 2 81 Location: 1156308-1156401 bp Feature: gene Location: 1156588-1156857 bp Ori: BAY43413.1 Feature: domain Description: COG2442 Location: 1156606-1156804 bp Feature: domain Description: COG2 442 Location: 1156606-1156804 bp Feature: gene Location: 1156936-1158888 bp Ori: BAY43414.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1157443-1157914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1157443-1157914 bp Feature: gene Location: 1159130-1159357 bp Ori: BAY43415.1 Feature: domain Description: PRK07590 Location: 1159172-1159346 bp Feature: domain Description: PRK07590 Location: 1159172 -1159346 bp Feature: gene Location: 1159495-1159725 bp Feature: gene Location: 4115426-4115839 bp Ori: BAY45959.1 Feature: domain Description: RAYT Location: 4115459-4115831 bp Feature: domain Description: RAYT Location: 4115459-4115831 bp Feature: gene Location: 4116200-4116604 bp Feature: gene Location: 4116536-4117594 bp Ori: BAY45961.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4116743-4117388 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4116743-4117388 bp Feature: gene Location: 4117591-4117935 bp Ori: BAY45962.1 Feature: domain Description: Avd_like Location: 4117609-4117915 bp Feature: domain Description: Avd_like Location: 4117609-4117915 bp Feature: gene Location: 4118074-4118928 bp Ori: BAY45963.1 Feature: domain Description: YfmG Location: 4118113-4118908 bp Feature: domain Description: YfmG Location: 4118113-4118908 bp Feature: gene Location: 4247490-4247984 bp Ori: BAY46066.1 Feature: domain Description: YjbI Location: 4247580-4247940 bp Feature: domain Description: YjbI Location: 42 47580-42 47940 bp Feature: gene Location: 4248152-4250791 bp Ori: BAY46067.1 Feature: domain Description: FHA Location: 4248164-4248716 bp Feature: domain Description: FHA Location: 42 48164-42 48716 bp Feature: domain Description: PAS Location: 4248782-4249031 bp Feature: domain Description: PAS Location: 42 48782 -42 49031 bp Feature: domain Description: GAF Location: 4249040-4249457 bp Feature: domain Description: GAF Location: 42 49040-42 49457 bp Feature: domain Description: PRK10060 Location: 4249469-4250756 bp Feature: domain Description: PRK10060 Location: 42 49469-42 50756 bp Feature: gene Location: 4251575-4252882 bp Ori: BAY46068.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4251890-4252043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42 51890-42 52 043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4252130-4252640 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42 52 130-42 52 640 bp Feature: gene Location: 4252944-4257050 bp Ori: BAY46069.1 Feature: domain Description: COG5635 Location: 4253451-4254576 bp Feature: domain Description: COG5635 Location: 42 53451-42 54576 bp Feature: domain Description: HEAT_2 Location: 4254807-4255038 bp Feature: domain Description: HEAT_2 Location: 42 54807-42 55038 bp Feature: domain Description: HEAT_2 Location: 4255299-4255437 bp Feature: domain Description: HEAT_2 Location: 42 552 99-42 55437 bp Feature: domain Description: HEAT_2 Location: 4255476-4255698 bp Feature: domain Description: HEAT_2 Location: 42 55476-42 55698 bp Feature: domain Description: HEAT_2 Location: 4255728-4255971 bp Feature: domain Description: HEAT_2 Location: 42 5572 8-42 55971 bp Feature: domain Description: HEAT_2 Location: 4256091-4256286 bp Feature: domain Description: HEAT_2 Location: 42 56091-42 562 86 bp Feature: domain Description: HEAT_2 Location: 4256322-4256484 bp Feature: domain Description: HEAT_2 Location: 42 5632 2 -42 56484 bp Feature: domain Description: HEAT_2 Location: 4256628-4256760 bp Feature: domain Description: HEAT_2 Location: 42 5662 8-42 56760 bp Feature: domain Description: HEAT_PBS Location: 4256769-4256844 bp Feature: domain Description: HEAT_PBS Location: 42 56769-42 56844 bp Feature: gene Location: 4257079-4258044 bp Ori: BAY46070.1 Feature: domain Description: Peptidase_C14 Location: 4257103-4257850 bp Feature: domain Description: Peptidase_C14 Location: 42 57103-42 57850 bp Sorry, your browser does not support inline SVG.
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