myDGR

myDGR report for SRS011239_Baylor_scaffold_1978

Seq: SRS011239_Baylor_scaffold_1978 (55668 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; genes next to RT

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 275-13671 bp 2 Locus 2: 35685-55597 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 275-892 bp Feature: CDS Location: 882-1478 bp Feature: CDS Location: 1475-2074 bp Feature: CDS Location: 2071-2451 bp Feature: CDS Location: 2448-2876 bp Feature: RT Des: DGR reverse transcriptase Location: 2839-4026 bp Feature: CDS Location: 4148-4285 bp Feature: target Des: target gene diversified by DGR Location: 4359-5720 bp Feature: CDS Location: 5730-6020 bp Feature: CDS Location: 6099-6584 bp Feature: CDS Location: 6589-11994 bp Feature: CDS Location: 11976-13160 bp Feature: CDS Location: 13162-13671 bp Feature: CDS Location: 35685-37115 bp Feature: CDS Location: 37102-37578 bp Feature: CDS Location: 37677-37916 bp Feature: CDS Location: 37949-38554 bp Feature: CDS Location: 38561-39676 bp Feature: CDS Location: 39666-40103 bp Feature: CDS Location: 40188-40628 bp Feature: CDS Location: 40628-41044 bp Feature: CDS Location: 41041-41298 bp Feature: CDS Location: 41300-42310 bp Feature: CDS Location: 42323-42499 bp Feature: CDS Location: 42663-43478 bp Feature: CDS Location: 43631-44101 bp Feature: CDS Location: 44369-45028 bp Feature: CDS Location: 44949-45764 bp Feature: CDS Location: 45812-46570 bp Feature: CDS Location: 46596-47030 bp Feature: target Des: target gene diversified by DGR Location: 47074-47703 bp Feature: CDS Location: 47835-48266 bp Feature: CDS Location: 48271-48999 bp Feature: CDS Location: 49006-49944 bp Feature: CDS Location: 49953-51914 bp Feature: CDS Location: 51916-52200 bp Feature: CDS Location: 52204-52416 bp Feature: CDS Location: 52431-52982 bp Feature: CDS Location: 52979-53224 bp Feature: CDS Location: 53369-53812 bp Feature: CDS Location: 53843-54043 bp Feature: CDS Location: 54040-54300 bp Feature: CDS Location: 54570-54815 bp Feature: CDS Location: 55070-55597 bp Sorry, your browser does not support inline SVG.