myDGR

myDGR report for SRS013215_Baylor_scaffold_1384

Seq: SRS013215_Baylor_scaffold_1384 (33842 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 2-21452 bp Zoom in on locus 1 Feature: CDS Location: 2-496 bp Feature: CDS Location: 640-1593 bp Feature: CDS Location: 1764-2954 bp Feature: CDS Location: 3307-3894 bp Feature: CDS Location: 3887-4486 bp Feature: CDS Location: 4746-5360 bp Feature: CDS Location: 5436-5918 bp Feature: CDS Location: 5923-9939 bp Feature: accessory Des: PAG1 Location: 9945-10262 bp Feature: CDS Location: 10259-10636 bp Feature: RT Des: DGR reverse transcriptase Location: 10617-11657 bp Feature: CDS Location: 11775-11924 bp Feature: target Des: target gene diversified by DGR Location: 11955-13382 bp Feature: CDS Location: 13421-14182 bp Feature: CDS Location: 14184-14921 bp Feature: CDS Location: 14911-15879 bp Feature: CDS Location: 15876-20714 bp Feature: CDS Location: 20707-20910 bp Feature: CDS Location: 20919-21452 bp Sorry, your browser does not support inline SVG.