myDGR

myDGR report for SRS014287_WUGC_scaffold_11775

Seq: SRS014287_WUGC_scaffold_11775 (49157 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 4968-27272 bp 2 Locus 2: 32704-49026 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 4968-5366 bp Feature: CDS Location: 5360-6763 bp Feature: CDS Location: 6754-9261 bp Feature: CDS Location: 9261-10295 bp Feature: CDS Location: 10309-10548 bp Feature: CDS Location: 10562-11071 bp Feature: CDS Location: 11076-11342 bp Feature: CDS Location: 11347-11910 bp Feature: CDS Location: 11907-12248 bp Feature: CDS Location: 12245-12805 bp Feature: CDS Location: 12809-13201 bp Feature: CDS Location: 13215-13880 bp Feature: CDS Location: 13867-14283 bp Feature: CDS Location: 14276-14527 bp Feature: CDS Location: 14528-14824 bp Feature: CDS Location: 14892-15605 bp Feature: target Des: target gene diversified by DGR Location: 15852-16508 bp Feature: CDS Location: 16692-16859 bp Feature: CDS Location: 16859-17317 bp Feature: CDS Location: 17323-17730 bp Feature: CDS Location: 17730-19220 bp Feature: CDS Location: 19220-19537 bp Feature: CDS Location: 19713-19940 bp Feature: CDS Location: 19955-20260 bp Feature: CDS Location: 20404-20640 bp Feature: CDS Location: 20883-21590 bp Feature: CDS Location: 21943-22443 bp Feature: CDS Location: 22550-22942 bp Feature: CDS Location: 22939-23283 bp Feature: CDS Location: 23288-23551 bp Feature: CDS Location: 23617-23847 bp Feature: CDS Location: 23953-24162 bp Feature: CDS Location: 24288-25043 bp Feature: CDS Location: 25046-25447 bp Feature: CDS Location: 25638-27272 bp Feature: CDS Location: 32704-33033 bp Feature: CDS Location: 33027-33482 bp Feature: CDS Location: 33488-38173 bp Feature: CDS Location: 38189-38560 bp Feature: CDS Location: 38573-40795 bp Feature: CDS Location: 40797-41222 bp Feature: CDS Location: 41223-41849 bp Feature: target Des: target gene diversified by DGR Location: 41852-42754 bp Feature: accessory Des: PAG3 Location: 42798-42995 bp Feature: accessory Des: PAG3 Location: 43003-43341 bp Feature: RT Des: DGR reverse transcriptase Location: 43495-44706 bp Feature: CDS Location: 44670-44999 bp Feature: CDS Location: 45106-45282 bp Feature: CDS Location: 45346-45672 bp Feature: CDS Location: 45688-47145 bp Feature: CDS Location: 47287-47553 bp Feature: CDS Location: 47872-49026 bp Sorry, your browser does not support inline SVG.