myDGR

myDGR report for SRS016018_WUGC_scaffold_5565

Seq: SRS016018_WUGC_scaffold_5565 (104312 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; genes next to RT

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 41206-62221 bp 2 Locus 2: 84239-104151 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 41206-42195 bp Feature: CDS Location: 42207-44201 bp Feature: CDS Location: 44198-44485 bp Feature: CDS Location: 44740-45291 bp Feature: CDS Location: 45293-45544 bp Feature: CDS Location: 45711-46193 bp Feature: CDS Location: 46226-46438 bp Feature: CDS Location: 46438-46695 bp Feature: CDS Location: 47087-48430 bp Feature: CDS Location: 48825-49442 bp Feature: CDS Location: 49432-50028 bp Feature: CDS Location: 50025-50624 bp Feature: CDS Location: 50621-51001 bp Feature: CDS Location: 50998-51426 bp Feature: RT Des: DGR reverse transcriptase Location: 51389-52576 bp Feature: CDS Location: 52698-52835 bp Feature: target Des: target gene diversified by DGR Location: 52909-54270 bp Feature: CDS Location: 54280-54570 bp Feature: CDS Location: 54649-55134 bp Feature: CDS Location: 55139-60544 bp Feature: CDS Location: 60526-61710 bp Feature: CDS Location: 61712-62221 bp Feature: CDS Location: 84239-85669 bp Feature: CDS Location: 85656-86132 bp Feature: CDS Location: 86231-86470 bp Feature: CDS Location: 86503-87108 bp Feature: CDS Location: 87115-88230 bp Feature: CDS Location: 88220-88657 bp Feature: CDS Location: 88742-89182 bp Feature: CDS Location: 89182-89598 bp Feature: CDS Location: 89595-89852 bp Feature: CDS Location: 89854-90864 bp Feature: CDS Location: 90877-91053 bp Feature: CDS Location: 91217-92032 bp Feature: CDS Location: 92185-92655 bp Feature: CDS Location: 92923-93582 bp Feature: CDS Location: 93503-94318 bp Feature: CDS Location: 94366-95124 bp Feature: CDS Location: 95150-95584 bp Feature: target Des: target gene diversified by DGR Location: 95628-96257 bp Feature: CDS Location: 96389-96820 bp Feature: CDS Location: 96825-97553 bp Feature: CDS Location: 97560-98498 bp Feature: CDS Location: 98507-100468 bp Feature: CDS Location: 100470-100754 bp Feature: CDS Location: 100758-100970 bp Feature: CDS Location: 100985-101536 bp Feature: CDS Location: 101533-101778 bp Feature: CDS Location: 101923-102366 bp Feature: CDS Location: 102397-102597 bp Feature: CDS Location: 102594-102854 bp Feature: CDS Location: 103124-103369 bp Feature: CDS Location: 103624-104151 bp Sorry, your browser does not support inline SVG.