myDGR

myDGR report for SRS016569_Baylor_scaffold_10980

Seq: SRS016569_Baylor_scaffold_10980 (54921 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3011-24887 bp 2 Locus 2: 27937-50958 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 3011-3865 bp Feature: CDS Location: 3870-5081 bp Feature: CDS Location: 5017-5943 bp Feature: CDS Location: 6007-7677 bp Feature: CDS Location: 7701-9383 bp Feature: CDS Location: 9646-10842 bp Feature: CDS Location: 10937-11368 bp Feature: CDS Location: 11368-11922 bp Feature: CDS Location: 12157-12426 bp Feature: CDS Location: 12432-12713 bp Feature: CDS Location: 12710-13186 bp Feature: accessory Des: CH1 Location: 13179-13667 bp Feature: RT Des: DGR reverse transcriptase Location: 13680-14966 bp Feature: CDS Location: 15090-15311 bp Feature: target Des: target gene diversified by DGR Location: 15336-22748 bp Feature: CDS Location: 22748-23257 bp Feature: CDS Location: 23247-24419 bp Feature: CDS Location: 24441-24887 bp Feature: CDS Location: 27937-28167 bp Feature: CDS Location: 28174-31494 bp Feature: CDS Location: 31506-33590 bp Feature: CDS Location: 33594-34697 bp Feature: CDS Location: 34694-35203 bp Feature: CDS Location: 35200-35625 bp Feature: CDS Location: 35609-36157 bp Feature: CDS Location: 36161-37345 bp Feature: CDS Location: 37342-37752 bp Feature: CDS Location: 37749-38660 bp Feature: CDS Location: 38667-39536 bp Feature: CDS Location: 39523-40293 bp Feature: target Des: target gene diversified by DGR Location: 40483-41136 bp Feature: CDS Location: 41156-41908 bp Feature: CDS Location: 41920-43314 bp Feature: CDS Location: 43408-44088 bp Feature: CDS Location: 44091-44696 bp Feature: CDS Location: 44611-45153 bp Feature: CDS Location: 45315-45668 bp Feature: CDS Location: 45671-47386 bp Feature: CDS Location: 47393-47980 bp Feature: CDS Location: 47996-48412 bp Feature: CDS Location: 48412-48972 bp Feature: CDS Location: 48974-49930 bp Feature: CDS Location: 49937-50275 bp Feature: CDS Location: 50278-50958 bp Sorry, your browser does not support inline SVG.