myDGR

myDGR report for SRS018351_Baylor_scaffold_12783

Seq: SRS018351_Baylor_scaffold_12783 (40874 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3-21810 bp 2 Locus 2: 9321-39996 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 3-314 bp Feature: target Des: target gene diversified by DGR Location: 311-1972 bp Feature: accessory Des: AVD Location: 2075-2527 bp Feature: CDS Location: 2538-2846 bp Feature: RT Des: DGR reverse transcriptase Location: 2932-4089 bp Feature: CDS Location: 4059-4643 bp Feature: CDS Location: 4640-4879 bp Feature: CDS Location: 4876-5142 bp Feature: CDS Location: 5155-5472 bp Feature: CDS Location: 5469-6242 bp Feature: CDS Location: 6301-7290 bp Feature: CDS Location: 7303-7695 bp Feature: CDS Location: 7692-9302 bp Feature: CDS Location: 9321-10679 bp Feature: CDS Location: 10690-21810 bp Feature: CDS Location: 9321-10679 bp Feature: CDS Location: 10690-21810 bp Feature: CDS Location: 21871-22254 bp Feature: CDS Location: 22367-22609 bp Feature: CDS Location: 22713-23768 bp Feature: CDS Location: 23873-24244 bp Feature: CDS Location: 24349-24582 bp Feature: CDS Location: 24592-24957 bp Feature: CDS Location: 24951-25367 bp Feature: CDS Location: 25384-25641 bp Feature: CDS Location: 25625-26272 bp Feature: CDS Location: 26285-26461 bp Feature: CDS Location: 26483-27736 bp Feature: CDS Location: 27757-28395 bp Feature: CDS Location: 28410-29129 bp Feature: CDS Location: 29134-29469 bp Feature: target Des: target gene diversified by DGR Location: 29494-30168 bp Feature: CDS Location: 30233-30406 bp Feature: CDS Location: 30420-30785 bp Feature: CDS Location: 30821-31576 bp Feature: CDS Location: 31681-31998 bp Feature: CDS Location: 32001-32204 bp Feature: CDS Location: 32240-32512 bp Feature: CDS Location: 32789-33322 bp Feature: CDS Location: 33291-34811 bp Feature: CDS Location: 34842-36977 bp Feature: CDS Location: 37104-37268 bp Feature: CDS Location: 37351-38325 bp Feature: CDS Location: 38342-38734 bp Feature: CDS Location: 38758-39765 bp Feature: CDS Location: 39781-39996 bp Sorry, your browser does not support inline SVG.