myDGR

myDGR report for SRS018656_WUGC_scaffold_1644

Seq: SRS018656_WUGC_scaffold_1644 (40455 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 415-16262 bp 2 Locus 2: 23462-40453 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 415-1797 bp Feature: CDS Location: 1865-2023 bp Feature: CDS Location: 2072-2464 bp Feature: CDS Location: 2594-2833 bp Feature: CDS Location: 2837-3925 bp Feature: CDS Location: 3938-4306 bp Feature: CDS Location: 4488-5141 bp Feature: CDS Location: 5313-5609 bp Feature: target Des: target gene diversified by DGR Location: 5902-6360 bp Feature: CDS Location: 6427-6633 bp Feature: CDS Location: 6635-6949 bp Feature: CDS Location: 7038-7256 bp Feature: CDS Location: 7259-7420 bp Feature: CDS Location: 7450-9519 bp Feature: CDS Location: 9524-9793 bp Feature: CDS Location: 9796-10779 bp Feature: CDS Location: 10784-11533 bp Feature: CDS Location: 11552-12610 bp Feature: CDS Location: 12626-12976 bp Feature: CDS Location: 12973-13311 bp Feature: CDS Location: 13295-13570 bp Feature: CDS Location: 13734-14336 bp Feature: CDS Location: 14349-14897 bp Feature: CDS Location: 14900-15397 bp Feature: CDS Location: 15394-15879 bp Feature: CDS Location: 15882-16262 bp Feature: CDS Location: 23462-25633 bp Feature: CDS Location: 25637-28498 bp Feature: CDS Location: 28501-28740 bp Feature: CDS Location: 28823-30055 bp Feature: CDS Location: 30079-31161 bp Feature: CDS Location: 31183-31803 bp Feature: CDS Location: 31810-32580 bp Feature: CDS Location: 32587-33768 bp Feature: CDS Location: 33806-34255 bp Feature: CDS Location: 34258-35319 bp Feature: target Des: target gene diversified by DGR Location: 35332-36678 bp Feature: accessory Des: AVD Location: 36750-37145 bp Feature: RT Des: DGR reverse transcriptase Location: 37196-38593 bp Feature: CDS Location: 38571-38831 bp Feature: CDS Location: 38855-39316 bp Feature: CDS Location: 39329-39604 bp Feature: CDS Location: 39607-40014 bp Feature: CDS Location: 40019-40453 bp Sorry, your browser does not support inline SVG.