myDGR

myDGR report for SRS018969_WUGC_scaffold_17555

Seq: SRS018969_WUGC_scaffold_17555 (49419 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3-20155 bp 2 Locus 2: 23208-45370 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 3-293 bp Feature: CDS Location: 229-1155 bp Feature: CDS Location: 1219-2889 bp Feature: CDS Location: 2913-4595 bp Feature: CDS Location: 4914-6110 bp Feature: CDS Location: 6205-6636 bp Feature: CDS Location: 6636-7190 bp Feature: CDS Location: 7425-7694 bp Feature: CDS Location: 7700-7981 bp Feature: CDS Location: 7978-8454 bp Feature: accessory Des: CH1 Location: 8447-8935 bp Feature: RT Des: DGR reverse transcriptase Location: 8948-10234 bp Feature: CDS Location: 10358-10579 bp Feature: target Des: target gene diversified by DGR Location: 10604-18016 bp Feature: CDS Location: 18016-18525 bp Feature: CDS Location: 18515-19687 bp Feature: CDS Location: 19709-20155 bp Feature: CDS Location: 23208-23438 bp Feature: CDS Location: 23445-26765 bp Feature: CDS Location: 26777-28861 bp Feature: CDS Location: 28865-29968 bp Feature: CDS Location: 29965-30474 bp Feature: CDS Location: 30471-30896 bp Feature: CDS Location: 30880-31428 bp Feature: CDS Location: 31432-32616 bp Feature: CDS Location: 32613-33017 bp Feature: CDS Location: 33038-33949 bp Feature: CDS Location: 33946-34722 bp Feature: target Des: target gene diversified by DGR Location: 34912-35565 bp Feature: CDS Location: 35585-36337 bp Feature: CDS Location: 36349-37743 bp Feature: CDS Location: 37837-38517 bp Feature: CDS Location: 38520-39125 bp Feature: CDS Location: 39040-39582 bp Feature: CDS Location: 39744-40097 bp Feature: CDS Location: 40100-41644 bp Feature: CDS Location: 41805-42392 bp Feature: CDS Location: 42408-42824 bp Feature: CDS Location: 42824-43384 bp Feature: CDS Location: 43386-44342 bp Feature: CDS Location: 44349-44687 bp Feature: CDS Location: 44690-45370 bp Sorry, your browser does not support inline SVG.