myDGR

myDGR report for SRS024075_LANL_scaffold_24173

Seq: SRS024075_LANL_scaffold_24173 (55284 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 4876-26130 bp 2 Locus 2: 21278-42451 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 4876-5439 bp Feature: CDS Location: 5441-5839 bp Feature: CDS Location: 5940-6092 bp Feature: CDS Location: 6117-6320 bp Feature: CDS Location: 6317-6565 bp Feature: CDS Location: 6848-7630 bp Feature: CDS Location: 7627-8328 bp Feature: CDS Location: 8407-9381 bp Feature: CDS Location: 9378-10265 bp Feature: CDS Location: 10292-10912 bp Feature: CDS Location: 10899-11198 bp Feature: CDS Location: 11213-11641 bp Feature: CDS Location: 11664-12407 bp Feature: CDS Location: 12416-12622 bp Feature: CDS Location: 13233-13700 bp Feature: CDS Location: 13711-13980 bp Feature: CDS Location: 13980-14525 bp Feature: CDS Location: 14850-15530 bp Feature: target Des: target gene diversified by DGR Location: 15556-16140 bp Feature: CDS Location: 16157-16792 bp Feature: CDS Location: 16692-17231 bp Feature: CDS Location: 17219-17518 bp Feature: CDS Location: 17808-18215 bp Feature: CDS Location: 18212-18721 bp Feature: CDS Location: 18714-18938 bp Feature: CDS Location: 19098-19736 bp Feature: CDS Location: 19733-20650 bp Feature: CDS Location: 20665-21057 bp Feature: CDS Location: 21069-21260 bp Feature: CDS Location: 21278-21451 bp Feature: CDS Location: 21448-22293 bp Feature: CDS Location: 22440-22625 bp Feature: CDS Location: 22626-23363 bp Feature: CDS Location: 23651-24346 bp Feature: CDS Location: 24368-24574 bp Feature: CDS Location: 24577-24861 bp Feature: CDS Location: 24866-25114 bp Feature: CDS Location: 25104-25397 bp Feature: CDS Location: 25486-26130 bp Feature: CDS Location: 21278-21451 bp Feature: CDS Location: 21448-22293 bp Feature: CDS Location: 22440-22625 bp Feature: CDS Location: 22626-23363 bp Feature: CDS Location: 23651-24346 bp Feature: CDS Location: 24368-24574 bp Feature: CDS Location: 24577-24861 bp Feature: CDS Location: 24866-25114 bp Feature: CDS Location: 25104-25397 bp Feature: CDS Location: 25486-26130 bp Feature: CDS Location: 26148-26540 bp Feature: CDS Location: 26572-27135 bp Feature: CDS Location: 27135-27836 bp Feature: CDS Location: 27857-28252 bp Feature: CDS Location: 28249-28734 bp Feature: CDS Location: 28769-29032 bp Feature: CDS Location: 29044-30198 bp Feature: CDS Location: 30203-30577 bp Feature: accessory Des: PAG1 Location: 30595-31182 bp Feature: CDS Location: 31201-31341 bp Feature: RT Des: DGR reverse transcriptase Location: 31344-32024 bp Feature: CDS Location: 32035-32364 bp Feature: target Des: target gene diversified by DGR Location: 32537-33856 bp Feature: CDS Location: 33878-34900 bp Feature: CDS Location: 34890-35117 bp Feature: CDS Location: 35123-36325 bp Feature: CDS Location: 36329-39166 bp Feature: CDS Location: 39168-39680 bp Feature: CDS Location: 39837-40793 bp Feature: CDS Location: 40998-41138 bp Feature: CDS Location: 41142-41747 bp Feature: CDS Location: 41801-42451 bp Sorry, your browser does not support inline SVG.