myDGR

myDGR report for SRS024331_LANL_scaffold_47838

Seq: SRS024331_LANL_scaffold_47838 (32423 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 6550-29227 bp Zoom in on locus 1 Feature: CDS Location: 6550-6804 bp Feature: CDS Location: 6815-7573 bp Feature: CDS Location: 7592-7927 bp Feature: CDS Location: 8071-8451 bp Feature: CDS Location: 8524-8943 bp Feature: CDS Location: 8913-9431 bp Feature: CDS Location: 9431-10183 bp Feature: CDS Location: 10188-10433 bp Feature: CDS Location: 10450-10833 bp Feature: CDS Location: 11020-11361 bp Feature: CDS Location: 11367-11525 bp Feature: CDS Location: 11598-11771 bp Feature: CDS Location: 12399-12572 bp Feature: CDS Location: 12593-13657 bp Feature: CDS Location: 13728-14432 bp Feature: CDS Location: 14498-14719 bp Feature: CDS Location: 14736-15269 bp Feature: CDS Location: 15459-15635 bp Feature: CDS Location: 15648-15965 bp Feature: RT Des: DGR reverse transcriptase Location: 15884-17134 bp Feature: accessory Des: PAG3 Location: 17248-17922 bp Feature: target Des: target gene diversified by DGR Location: 17977-18963 bp Feature: CDS Location: 18978-19373 bp Feature: CDS Location: 19370-20647 bp Feature: CDS Location: 20653-21771 bp Feature: CDS Location: 21786-22223 bp Feature: CDS Location: 22238-22594 bp Feature: CDS Location: 22610-23851 bp Feature: CDS Location: 23861-24544 bp Feature: CDS Location: 24548-29227 bp Sorry, your browser does not support inline SVG.