myDGR

myDGR report for SRS044373_WUGC_scaffold_24244

Seq: SRS044373_WUGC_scaffold_24244 (45840 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3693-25976 bp 2 Locus 2: 20560-45230 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 3693-3929 bp Feature: CDS Location: 4058-4738 bp Feature: CDS Location: 4741-5079 bp Feature: CDS Location: 5086-6042 bp Feature: CDS Location: 6044-6580 bp Feature: CDS Location: 6580-6996 bp Feature: CDS Location: 7012-7599 bp Feature: CDS Location: 7606-9321 bp Feature: CDS Location: 9324-9677 bp Feature: CDS Location: 9839-10381 bp Feature: CDS Location: 10296-10901 bp Feature: CDS Location: 10904-11584 bp Feature: CDS Location: 11678-13072 bp Feature: CDS Location: 13084-13836 bp Feature: target Des: target gene diversified by DGR Location: 13856-14509 bp Feature: CDS Location: 14699-15475 bp Feature: CDS Location: 15472-16383 bp Feature: CDS Location: 16404-16808 bp Feature: CDS Location: 16805-17989 bp Feature: CDS Location: 17993-18541 bp Feature: CDS Location: 18525-18950 bp Feature: CDS Location: 18947-19456 bp Feature: CDS Location: 19453-20556 bp Feature: CDS Location: 20560-22644 bp Feature: CDS Location: 22656-25976 bp Feature: CDS Location: 20560-22644 bp Feature: CDS Location: 22656-25976 bp Feature: CDS Location: 25983-26213 bp Feature: CDS Location: 26367-27572 bp Feature: CDS Location: 27593-28654 bp Feature: CDS Location: 28669-29265 bp Feature: CDS Location: 29266-29712 bp Feature: CDS Location: 29734-30906 bp Feature: CDS Location: 30896-31405 bp Feature: target Des: target gene diversified by DGR Location: 31405-38817 bp Feature: CDS Location: 38842-39063 bp Feature: RT Des: DGR reverse transcriptase Location: 39187-40473 bp Feature: accessory Des: CH1 Location: 40486-40974 bp Feature: CDS Location: 40967-41443 bp Feature: CDS Location: 41440-41721 bp Feature: CDS Location: 41727-41996 bp Feature: CDS Location: 42231-42785 bp Feature: CDS Location: 42785-43216 bp Feature: CDS Location: 43311-44507 bp Feature: CDS Location: 44826-45230 bp Sorry, your browser does not support inline SVG.