myDGR

myDGR report for SRS049995_LANL_scaffold_4188

Seq: SRS049995_LANL_scaffold_4188 (37176 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 2-16027 bp 2 Locus 2: 22976-37173 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 2-862 bp Feature: CDS Location: 1194-1712 bp Feature: CDS Location: 1766-2197 bp Feature: CDS Location: 2244-2720 bp Feature: CDS Location: 2744-3004 bp Feature: RT Des: DGR reverse transcriptase Location: 2982-4379 bp Feature: accessory Des: AVD Location: 4430-4825 bp Feature: target Des: target gene diversified by DGR Location: 4877-6334 bp Feature: target Des: target gene diversified by DGR Location: 4877-6334 bp Feature: CDS Location: 6347-7408 bp Feature: CDS Location: 7411-7860 bp Feature: CDS Location: 7898-9079 bp Feature: CDS Location: 9086-9856 bp Feature: CDS Location: 9863-10483 bp Feature: CDS Location: 10505-11587 bp Feature: CDS Location: 11609-12841 bp Feature: CDS Location: 12924-13163 bp Feature: CDS Location: 13166-16027 bp Feature: CDS Location: 22976-23827 bp Feature: CDS Location: 23817-24749 bp Feature: CDS Location: 24900-25376 bp Feature: CDS Location: 25401-25781 bp Feature: CDS Location: 25784-26269 bp Feature: CDS Location: 26266-26763 bp Feature: CDS Location: 26766-27203 bp Feature: CDS Location: 27311-27586 bp Feature: CDS Location: 27570-27908 bp Feature: CDS Location: 27905-28255 bp Feature: CDS Location: 28270-29322 bp Feature: CDS Location: 29341-30090 bp Feature: CDS Location: 30095-31078 bp Feature: CDS Location: 31199-31351 bp Feature: CDS Location: 31356-33425 bp Feature: CDS Location: 33455-33616 bp Feature: CDS Location: 33619-33837 bp Feature: CDS Location: 33926-34240 bp Feature: CDS Location: 34242-34448 bp Feature: target Des: target gene diversified by DGR Location: 34515-35039 bp Feature: target Des: target gene diversified by DGR Location: 34515-35039 bp Feature: CDS Location: 35082-35372 bp Feature: CDS Location: 35504-36157 bp Feature: CDS Location: 36139-36708 bp Feature: CDS Location: 36721-37173 bp Sorry, your browser does not support inline SVG.