myDGR

myDGR report for SRS050925_LANL_scaffold_48374

Seq: SRS050925_LANL_scaffold_48374 (33483 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 8284-29243 bp Zoom in on locus 1 Feature: CDS Location: 8284-8673 bp Feature: CDS Location: 8686-9117 bp Feature: CDS Location: 9120-9641 bp Feature: CDS Location: 9709-10128 bp Feature: CDS Location: 10128-10730 bp Feature: CDS Location: 10768-10920 bp Feature: CDS Location: 10968-14513 bp Feature: CDS Location: 14513-15445 bp Feature: CDS Location: 15448-16539 bp Feature: CDS Location: 16543-17484 bp Feature: target Des: target gene diversified by DGR Location: 17496-18425 bp Feature: accessory Des: PAG3 Location: 18482-19099 bp Feature: CDS Location: 19017-19277 bp Feature: RT Des: DGR reverse transcriptase Location: 19518-20675 bp Feature: CDS Location: 20679-21365 bp Feature: CDS Location: 21362-21790 bp Feature: CDS Location: 21795-21968 bp Feature: CDS Location: 21988-22359 bp Feature: CDS Location: 22473-22799 bp Feature: CDS Location: 22862-24358 bp Feature: CDS Location: 25205-25408 bp Feature: CDS Location: 25423-25641 bp Feature: CDS Location: 25656-26165 bp Feature: CDS Location: 26182-26565 bp Feature: CDS Location: 26593-26796 bp Feature: CDS Location: 26808-26969 bp Feature: CDS Location: 26982-27515 bp Feature: CDS Location: 27519-27803 bp Feature: CDS Location: 27806-28360 bp Feature: CDS Location: 28373-28948 bp Feature: CDS Location: 28905-29243 bp Sorry, your browser does not support inline SVG.