myDGR

myDGR report for SRS052027_LANL_scaffold_24280

Seq: SRS052027_LANL_scaffold_24280 (49862 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 31272-49538 bp Zoom in on locus 1 Feature: CDS Location: 31272-31841 bp Feature: CDS Location: 32001-36698 bp Feature: CDS Location: 36702-37403 bp Feature: CDS Location: 37416-38657 bp Feature: CDS Location: 38671-39048 bp Feature: CDS Location: 39062-39496 bp Feature: CDS Location: 39510-40634 bp Feature: CDS Location: 40644-41696 bp Feature: CDS Location: 41700-42083 bp Feature: CDS Location: 42107-42391 bp Feature: target Des: target gene diversified by DGR Location: 42416-43276 bp Feature: accessory Des: PAG2 Location: 43351-43812 bp Feature: CDS Location: 43816-43974 bp Feature: RT Des: DGR reverse transcriptase Location: 44067-45470 bp Feature: CDS Location: 45463-45681 bp Feature: CDS Location: 45671-45952 bp Feature: CDS Location: 45967-46278 bp Feature: CDS Location: 46288-46644 bp Feature: CDS Location: 46637-47008 bp Feature: CDS Location: 47018-48535 bp Feature: CDS Location: 48616-49377 bp Feature: CDS Location: 49410-49538 bp Sorry, your browser does not support inline SVG.