myDGR

myDGR report for SRS053398_LANL_scaffold_24779

Seq: SRS053398_LANL_scaffold_24779 (36654 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 5495-26788 bp 2 Locus 2: 21984-36612 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 5495-6007 bp Feature: CDS Location: 6547-6918 bp Feature: CDS Location: 6928-7653 bp Feature: CDS Location: 7663-8094 bp Feature: CDS Location: 8208-8789 bp Feature: CDS Location: 9261-9773 bp Feature: CDS Location: 9778-12648 bp Feature: CDS Location: 12645-13850 bp Feature: CDS Location: 13852-14085 bp Feature: CDS Location: 14069-15091 bp Feature: target Des: target gene diversified by DGR Location: 15112-16431 bp Feature: CDS Location: 16461-16664 bp Feature: RT Des: DGR reverse transcriptase Location: 16948-17763 bp Feature: CDS Location: 17729-17959 bp Feature: accessory Des: PAG1 Location: 17907-18491 bp Feature: CDS Location: 18513-18908 bp Feature: CDS Location: 18915-20090 bp Feature: CDS Location: 20093-20356 bp Feature: CDS Location: 20384-20851 bp Feature: CDS Location: 20829-21245 bp Feature: CDS Location: 21274-21981 bp Feature: CDS Location: 21984-22541 bp Feature: CDS Location: 22583-22984 bp Feature: CDS Location: 22992-23168 bp Feature: CDS Location: 23171-23836 bp Feature: CDS Location: 23927-24220 bp Feature: CDS Location: 24607-25122 bp Feature: CDS Location: 25119-25526 bp Feature: CDS Location: 25523-26788 bp Feature: CDS Location: 21984-22541 bp Feature: CDS Location: 22583-22984 bp Feature: CDS Location: 22992-23168 bp Feature: CDS Location: 23171-23836 bp Feature: CDS Location: 23927-24220 bp Feature: CDS Location: 24607-25122 bp Feature: CDS Location: 25119-25526 bp Feature: CDS Location: 25523-26788 bp Feature: CDS Location: 26975-27250 bp Feature: CDS Location: 27250-27588 bp Feature: CDS Location: 27739-27975 bp Feature: CDS Location: 27977-28894 bp Feature: CDS Location: 28894-29304 bp Feature: CDS Location: 29301-29546 bp Feature: CDS Location: 29673-30017 bp Feature: CDS Location: 30536-30877 bp Feature: CDS Location: 30874-31014 bp Feature: CDS Location: 31026-31808 bp Feature: CDS Location: 31881-32135 bp Feature: CDS Location: 32092-32508 bp Feature: CDS Location: 32512-32691 bp Feature: target Des: target gene diversified by DGR Location: 32743-33324 bp Feature: CDS Location: 33333-34043 bp Feature: CDS Location: 34015-34698 bp Feature: CDS Location: 34565-34984 bp Feature: CDS Location: 34990-35952 bp Feature: CDS Location: 36076-36612 bp Sorry, your browser does not support inline SVG.