myDGR

myDGR report for SRS054590_LANL_scaffold_823

Seq: SRS054590_LANL_scaffold_823 (61071 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 21742-42548 bp Zoom in on locus 1 Feature: CDS Location: 21742-21906 bp Feature: CDS Location: 22026-22595 bp Feature: CDS Location: 22666-23625 bp Feature: CDS Location: 23628-23888 bp Feature: CDS Location: 23903-24505 bp Feature: CDS Location: 24525-24695 bp Feature: CDS Location: 24795-25061 bp Feature: CDS Location: 25132-25905 bp Feature: target Des: target gene diversified by DGR Location: 25905-26783 bp Feature: CDS Location: 26816-27106 bp Feature: CDS Location: 27143-27313 bp Feature: CDS Location: 27360-28139 bp Feature: CDS Location: 28162-28491 bp Feature: CDS Location: 28667-28885 bp Feature: CDS Location: 28947-29309 bp Feature: CDS Location: 29368-29826 bp Feature: CDS Location: 29863-30330 bp Feature: CDS Location: 30379-30603 bp Feature: CDS Location: 30746-30976 bp Feature: CDS Location: 31009-31218 bp Feature: CDS Location: 31220-31639 bp Feature: CDS Location: 31641-31892 bp Feature: CDS Location: 32112-32240 bp Feature: CDS Location: 32294-32452 bp Feature: CDS Location: 32479-32796 bp Feature: CDS Location: 32928-34178 bp Feature: CDS Location: 34408-34659 bp Feature: CDS Location: 34673-35254 bp Feature: CDS Location: 35315-35611 bp Feature: CDS Location: 35623-35961 bp Feature: RT Des: DGR reverse transcriptase Location: 35964-37160 bp Feature: accessory Des: PAG3 Location: 37371-37856 bp Feature: CDS Location: 37853-37996 bp Feature: CDS Location: 38012-38320 bp Feature: target Des: target gene diversified by DGR Location: 38421-39392 bp Feature: CDS Location: 39410-40540 bp Feature: CDS Location: 40561-41631 bp Feature: CDS Location: 41634-42548 bp Sorry, your browser does not support inline SVG.