myDGR

myDGR report for SRS054956_LANL_scaffold_45565

Seq: SRS054956_LANL_scaffold_45565 (23013 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 2-14669 bp Zoom in on locus 1 Feature: CDS Location: 2-349 bp Feature: CDS Location: 396-623 bp Feature: CDS Location: 610-834 bp Feature: CDS Location: 953-1162 bp Feature: RT Des: DGR reverse transcriptase Location: 1380-2501 bp Feature: CDS Location: 2589-2807 bp Feature: accessory Des: Avd_like Location: 2814-3245 bp Feature: target Des: target gene diversified by DGR Location: 3300-4496 bp Feature: CDS Location: 4527-4805 bp Feature: CDS Location: 5052-6059 bp Feature: CDS Location: 6072-6686 bp Feature: CDS Location: 6805-8130 bp Feature: CDS Location: 8117-8458 bp Feature: CDS Location: 8473-8778 bp Feature: CDS Location: 8819-9355 bp Feature: CDS Location: 9489-9995 bp Feature: CDS Location: 10027-10593 bp Feature: CDS Location: 10577-11128 bp Feature: CDS Location: 11119-12171 bp Feature: CDS Location: 12176-12583 bp Feature: CDS Location: 12580-12903 bp Feature: CDS Location: 12930-14669 bp Sorry, your browser does not support inline SVG.