myDGR

myDGR report for SRS077730_LANL_scaffold_11133

Seq: SRS077730_LANL_scaffold_11133 (51006 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 17026-38674 bp 2 Locus 2: 30541-51003 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 17026-17235 bp Feature: CDS Location: 17228-19018 bp Feature: CDS Location: 19021-19809 bp Feature: CDS Location: 19838-20227 bp Feature: CDS Location: 20241-20555 bp Feature: CDS Location: 20575-21696 bp Feature: CDS Location: 21689-22603 bp Feature: CDS Location: 22605-23549 bp Feature: CDS Location: 23654-24589 bp Feature: CDS Location: 24668-25063 bp Feature: CDS Location: 25135-25566 bp Feature: CDS Location: 25825-26199 bp Feature: accessory Des: PAG3 Location: 27113-27580 bp Feature: CDS Location: 27634-28047 bp Feature: RT Des: DGR reverse transcriptase Location: 28147-29298 bp Feature: CDS Location: 29295-29714 bp Feature: CDS Location: 29720-30106 bp Feature: CDS Location: 30263-30466 bp Feature: CDS Location: 30541-30852 bp Feature: CDS Location: 30865-31272 bp Feature: CDS Location: 31289-32245 bp Feature: CDS Location: 32261-32572 bp Feature: CDS Location: 32629-33579 bp Feature: CDS Location: 33777-33998 bp Feature: CDS Location: 34060-35136 bp Feature: CDS Location: 35404-35685 bp Feature: CDS Location: 35690-35914 bp Feature: CDS Location: 35931-36497 bp Feature: CDS Location: 36494-37933 bp Feature: CDS Location: 38135-38674 bp Feature: CDS Location: 30541-30852 bp Feature: CDS Location: 30865-31272 bp Feature: CDS Location: 31289-32245 bp Feature: CDS Location: 32261-32572 bp Feature: CDS Location: 32629-33579 bp Feature: CDS Location: 33777-33998 bp Feature: CDS Location: 34060-35136 bp Feature: CDS Location: 35404-35685 bp Feature: CDS Location: 35690-35914 bp Feature: CDS Location: 35931-36497 bp Feature: CDS Location: 36494-37933 bp Feature: CDS Location: 38135-38674 bp Feature: CDS Location: 38664-39764 bp Feature: CDS Location: 39751-40032 bp Feature: CDS Location: 40032-40388 bp Feature: target Des: target gene diversified by DGR Location: 40435-41322 bp Feature: CDS Location: 41378-41743 bp Feature: CDS Location: 42004-42843 bp Feature: CDS Location: 42840-43391 bp Feature: CDS Location: 43430-43963 bp Feature: CDS Location: 43965-44210 bp Feature: CDS Location: 44207-44836 bp Feature: CDS Location: 44844-45002 bp Feature: CDS Location: 45025-45510 bp Feature: CDS Location: 45799-46017 bp Feature: CDS Location: 46020-46280 bp Feature: CDS Location: 46339-46554 bp Feature: CDS Location: 46602-46751 bp Feature: CDS Location: 46799-47761 bp Feature: CDS Location: 47853-48296 bp Feature: CDS Location: 48325-48729 bp Feature: CDS Location: 48487-50784 bp Feature: CDS Location: 48805-49725 bp Feature: CDS Location: 49822-50235 bp Feature: CDS Location: 50878-51003 bp Sorry, your browser does not support inline SVG.