myDGR

myDGR report for SRS077730_LANL_scaffold_668

Seq: SRS077730_LANL_scaffold_668 (115511 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 54941-78235 bp 2 Locus 2: 104847-115509 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 54941-55771 bp Feature: CDS Location: 55783-58005 bp Feature: CDS Location: 58008-58520 bp Feature: CDS Location: 58746-59156 bp Feature: CDS Location: 59168-59623 bp Feature: CDS Location: 59677-59865 bp Feature: CDS Location: 59952-61148 bp Feature: CDS Location: 61458-61607 bp Feature: CDS Location: 61658-61942 bp Feature: CDS Location: 61960-62475 bp Feature: CDS Location: 62539-64137 bp Feature: CDS Location: 64203-64598 bp Feature: CDS Location: 64605-64991 bp Feature: CDS Location: 65092-65451 bp Feature: CDS Location: 65448-65891 bp Feature: CDS Location: 65965-66519 bp Feature: RT Des: DGR reverse transcriptase Location: 66721-68034 bp Feature: CDS Location: 68060-68233 bp Feature: accessory Des: PAG3 Location: 68285-68836 bp Feature: target Des: target gene diversified by DGR Location: 68912-69844 bp Feature: CDS Location: 69860-71761 bp Feature: CDS Location: 71786-78235 bp Feature: CDS Location: 104847-105026 bp Feature: CDS Location: 105172-105957 bp Feature: CDS Location: 105954-108701 bp Feature: CDS Location: 108915-110162 bp Feature: CDS Location: 110903-112057 bp Feature: CDS Location: 113098-113841 bp Feature: CDS Location: 113966-114400 bp Feature: CDS Location: 114427-114639 bp Feature: CDS Location: 114639-114932 bp Feature: target Des: target gene diversified by DGR Location: 114943-115509 bp Sorry, your browser does not support inline SVG.