myDGR

myDGR report for CP000393.1

Seq: CP000393.1 (7750108 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 373560-395910 bp 2 Locus 2: 720211-744134 bp 3 Locus 3: 1605057-1628632 bp 4 Locus 4: 2621232-2645032 bp 5 Locus 5: 3233677-3255833 bp 6 Locus 6: 3327002-3349204 bp 7 Locus 7: 4386424-4408687 bp 8 Locus 8: 5061694-5083074 bp 9 Locus 9: 5233239-5254453 bp 10 Locus 10: 5697711-5719536 bp 11 Locus 11: 6621694-6644747 bp Zoom in on locus 1 Zoom in on locus 2 Zoom in on locus 3 Zoom in on locus 4 Zoom in on locus 5 Zoom in on locus 6 Zoom in on locus 7 Zoom in on locus 8 Zoom in on locus 9 Zoom in on locus 10 Zoom in on locus 11 Feature: CDS Location: 373560-375467 bp Feature: CDS Location: 375832-377736 bp Feature: CDS Location: 378375-378545 bp Feature: CDS Location: 379093-380244 bp Feature: CDS Location: 380511-381323 bp Feature: CDS Location: 382366-383226 bp Feature: CDS Location: 383619-384155 bp Feature: CDS Location: 384664-384813 bp Feature: CDS Location: 384893-385255 bp Feature: CDS Location: 385291-385422 bp Feature: target Des: target gene diversified by DGR Location: 385456-387327 bp Feature: CDS Location: 387526-387666 bp Feature: CDS Location: 388418-388723 bp Feature: CDS Location: 389236-389379 bp Feature: CDS Location: 389480-390406 bp Feature: CDS Location: 390886-392010 bp Feature: CDS Location: 392356-392556 bp Feature: CDS Location: 392631-393239 bp Feature: CDS Location: 393976-394140 bp Feature: CDS Location: 394356-394517 bp Feature: CDS Location: 394703-395062 bp Feature: CDS Location: 395770-395910 bp Feature: CDS Location: 720211-720456 bp Feature: CDS Location: 721508-723409 bp Feature: CDS Location: 724335-725195 bp Feature: CDS Location: 725804-726748 bp Feature: CDS Location: 727178-728614 bp Feature: CDS Location: 728934-729071 bp Feature: target Des: target gene diversified by DGR Location: 729656-731518 bp Feature: target Des: target gene diversified by DGR Location: 731760-733625 bp Feature: target Des: target gene diversified by DGR Location: 733867-735744 bp Feature: target Des: target gene diversified by DGR Location: 735970-737883 bp Feature: CDS Location: 738642-739295 bp Feature: CDS Location: 739494-744134 bp Feature: CDS Location: 1605057-1606238 bp Feature: CDS Location: 1607634-1607849 bp Feature: CDS Location: 1608194-1608409 bp Feature: CDS Location: 1608690-1608947 bp Feature: CDS Location: 1613207-1613986 bp Feature: target Des: target gene diversified by DGR Location: 1614150-1614713 bp Feature: accessory Des: AVD Location: 1615167-1615469 bp Feature: RT Des: DGR reverse transcriptase Location: 1615715-1616581 bp Feature: CDS Location: 1617024-1617200 bp Feature: CDS Location: 1617908-1618084 bp Feature: target Des: target gene diversified by DGR Location: 1619340-1621193 bp Feature: CDS Location: 1621910-1622038 bp Feature: CDS Location: 1624555-1625238 bp Feature: CDS Location: 1625440-1627242 bp Feature: CDS Location: 1627718-1628632 bp Feature: CDS Location: 2621232-2622833 bp Feature: CDS Location: 2623263-2624444 bp Feature: CDS Location: 2624876-2625889 bp Feature: CDS Location: 2626840-2627082 bp Feature: target Des: target gene diversified by DGR Location: 2631605-2632483 bp Feature: RT Des: DGR reverse transcriptase Location: 2632880-2633413 bp Feature: accessory Des: AVD Location: 2633969-2634310 bp Feature: target Des: target gene diversified by DGR Location: 2634407-2637040 bp Feature: CDS Location: 2637044-2638096 bp Feature: CDS Location: 2638093-2640024 bp Feature: CDS Location: 2640087-2640437 bp Feature: CDS Location: 2640871-2641221 bp Feature: CDS Location: 2641515-2641649 bp Feature: CDS Location: 2643845-2645032 bp Feature: CDS Location: 3233677-3233826 bp Feature: CDS Location: 3233969-3236647 bp Feature: CDS Location: 3236804-3237550 bp Feature: CDS Location: 3237753-3238223 bp Feature: CDS Location: 3238692-3239666 bp Feature: CDS Location: 3239753-3241135 bp Feature: CDS Location: 3241214-3243199 bp Feature: target Des: target gene diversified by DGR Location: 3243857-3245767 bp Feature: CDS Location: 3246669-3247730 bp Feature: CDS Location: 3247778-3248368 bp Feature: CDS Location: 3248488-3248709 bp Feature: CDS Location: 3248776-3249054 bp Feature: CDS Location: 3249641-3249787 bp Feature: CDS Location: 3249986-3251362 bp Feature: CDS Location: 3251479-3251907 bp Feature: CDS Location: 3251904-3252446 bp Feature: CDS Location: 3253560-3253838 bp Feature: CDS Location: 3253980-3255833 bp Feature: CDS Location: 3327002-3327271 bp Feature: CDS Location: 3327914-3328837 bp Feature: CDS Location: 3328892-3330991 bp Feature: CDS Location: 3331996-3332943 bp Feature: CDS Location: 3333209-3333715 bp Feature: CDS Location: 3333958-3334386 bp Feature: target Des: target gene diversified by DGR Location: 3334629-3340364 bp Feature: CDS Location: 3340972-3341622 bp Feature: CDS Location: 3341786-3342769 bp Feature: CDS Location: 3343071-3343733 bp Feature: CDS Location: 3344106-3344486 bp Feature: CDS Location: 3345601-3346149 bp Feature: CDS Location: 3346524-3347168 bp Feature: CDS Location: 3348503-3349204 bp Feature: CDS Location: 4386424-4386564 bp Feature: CDS Location: 4387208-4388734 bp Feature: CDS Location: 4388852-4389517 bp Feature: CDS Location: 4389814-4390047 bp Feature: CDS Location: 4390032-4391630 bp Feature: CDS Location: 4391624-4391959 bp Feature: CDS Location: 4392160-4392315 bp Feature: CDS Location: 4392554-4393909 bp Feature: CDS Location: 4394349-4396478 bp Feature: target Des: target gene diversified by DGR Location: 4396679-4398478 bp Feature: CDS Location: 4399288-4401162 bp Feature: CDS Location: 4402324-4402839 bp Feature: CDS Location: 4403666-4403878 bp Feature: CDS Location: 4404604-4405752 bp Feature: CDS Location: 4405803-4406363 bp Feature: CDS Location: 4406496-4406747 bp Feature: CDS Location: 4406936-4408687 bp Feature: CDS Location: 5061694-5061903 bp Feature: CDS Location: 5062119-5064692 bp Feature: CDS Location: 5064988-5066241 bp Feature: CDS Location: 5066444-5066794 bp Feature: CDS Location: 5067364-5067738 bp Feature: RT Des: DGR reverse transcriptase Location: 5068307-5070214 bp Feature: CDS Location: 5070436-5071044 bp Feature: CDS Location: 5073095-5073235 bp Feature: CDS Location: 5073506-5075638 bp Feature: CDS Location: 5078223-5078354 bp Feature: CDS Location: 5078383-5078529 bp Feature: CDS Location: 5078709-5078846 bp Feature: CDS Location: 5080582-5080959 bp Feature: CDS Location: 5081445-5081774 bp Feature: CDS Location: 5082229-5083074 bp Feature: CDS Location: 5233239-5233376 bp Feature: CDS Location: 5235407-5235826 bp Feature: CDS Location: 5235905-5236444 bp Feature: CDS Location: 5236560-5237315 bp Feature: CDS Location: 5237412-5237549 bp Feature: CDS Location: 5238089-5239618 bp Feature: CDS Location: 5240690-5241010 bp Feature: CDS Location: 5241136-5242893 bp Feature: target Des: target gene diversified by DGR Location: 5244126-5244533 bp Feature: CDS Location: 5244696-5244947 bp Feature: CDS Location: 5245025-5245189 bp Feature: CDS Location: 5245305-5245535 bp Feature: CDS Location: 5247102-5249225 bp Feature: CDS Location: 5250054-5250512 bp Feature: CDS Location: 5250688-5251251 bp Feature: CDS Location: 5251339-5252268 bp Feature: CDS Location: 5252486-5253415 bp Feature: CDS Location: 5253486-5253737 bp Feature: CDS Location: 5253848-5254453 bp Feature: CDS Location: 5697711-5698598 bp Feature: CDS Location: 5699408-5700592 bp Feature: CDS Location: 5701248-5701946 bp Feature: CDS Location: 5702511-5702855 bp Feature: CDS Location: 5702852-5703775 bp Feature: CDS Location: 5703805-5704041 bp Feature: CDS Location: 5704608-5705693 bp Feature: CDS Location: 5705712-5706707 bp Feature: CDS Location: 5706775-5707839 bp Feature: target Des: target gene diversified by DGR Location: 5707847-5709430 bp Feature: CDS Location: 5710216-5710521 bp Feature: CDS Location: 5712913-5713839 bp Feature: CDS Location: 5714303-5715343 bp Feature: CDS Location: 5715997-5716530 bp Feature: CDS Location: 5716569-5716757 bp Feature: CDS Location: 5716920-5717138 bp Feature: CDS Location: 5717512-5719536 bp Feature: CDS Location: 6621694-6623022 bp Feature: CDS Location: 6623422-6623607 bp Feature: CDS Location: 6624979-6625515 bp Feature: CDS Location: 6626717-6630622 bp Feature: target Des: target gene diversified by DGR Location: 6633517-6636105 bp Feature: CDS Location: 6636392-6637150 bp Feature: CDS Location: 6637711-6637995 bp Feature: CDS Location: 6640564-6641658 bp Feature: CDS Location: 6641688-6643400 bp Feature: CDS Location: 6644325-6644747 bp Sorry, your browser does not support inline SVG.