myDGR

myDGR report for SRS013687_Baylor_scaffold_59360

Seq: SRS013687_Baylor_scaffold_59360 (51981 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3-22087 bp 2 Locus 2: 35611-51852 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 3-578 bp Feature: CDS Location: 684-1262 bp Feature: CDS Location: 1327-1749 bp Feature: CDS Location: 2119-3426 bp Feature: CDS Location: 3426-3728 bp Feature: CDS Location: 4124-4549 bp Feature: CDS Location: 4736-4960 bp Feature: CDS Location: 4991-5554 bp Feature: CDS Location: 5725-5964 bp Feature: CDS Location: 5952-6362 bp Feature: CDS Location: 6580-6864 bp Feature: CDS Location: 6883-7563 bp Feature: CDS Location: 7565-9616 bp Feature: target Des: target gene diversified by DGR Location: 9649-10386 bp Feature: CDS Location: 10398-11225 bp Feature: CDS Location: 11228-11980 bp Feature: CDS Location: 11992-12387 bp Feature: target Des: target gene diversified by DGR Location: 12406-12954 bp Feature: CDS Location: 12951-13223 bp Feature: CDS Location: 13220-14068 bp Feature: CDS Location: 14144-14974 bp Feature: CDS Location: 14868-15584 bp Feature: CDS Location: 15688-16296 bp Feature: CDS Location: 16311-16565 bp Feature: CDS Location: 16576-16797 bp Feature: CDS Location: 16943-17218 bp Feature: CDS Location: 17240-17593 bp Feature: CDS Location: 17626-17913 bp Feature: CDS Location: 18038-18340 bp Feature: CDS Location: 18344-18856 bp Feature: CDS Location: 18853-19101 bp Feature: CDS Location: 19098-19328 bp Feature: CDS Location: 19339-19515 bp Feature: CDS Location: 19520-19876 bp Feature: CDS Location: 19866-20282 bp Feature: CDS Location: 20531-22087 bp Feature: CDS Location: 35611-36183 bp Feature: CDS Location: 36398-40588 bp Feature: CDS Location: 40598-41101 bp Feature: CDS Location: 41107-42324 bp Feature: CDS Location: 42309-46334 bp Feature: CDS Location: 46483-46743 bp Feature: target Des: target gene diversified by DGR Location: 46755-48089 bp Feature: accessory Des: PAG1 Location: 48133-48477 bp Feature: RT Des: DGR reverse transcriptase Location: 48734-49768 bp Feature: CDS Location: 49746-50117 bp Feature: CDS Location: 50119-50589 bp Feature: CDS Location: 50576-51151 bp Feature: CDS Location: 51148-51852 bp Sorry, your browser does not support inline SVG.