myDGR

myDGR report for SRS014459_WUGC_scaffold_35466

Seq: SRS014459_WUGC_scaffold_35466 (50266 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; genes next to RT

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3-15609 bp 2 Locus 2: 29843-50265 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 3-500 bp Feature: CDS Location: 487-981 bp Feature: CDS Location: 985-1383 bp Feature: CDS Location: 1402-1785 bp Feature: RT Des: DGR reverse transcriptase Location: 1763-2773 bp Feature: target Des: target gene diversified by DGR Location: 3133-4500 bp Feature: CDS Location: 4502-4774 bp Feature: CDS Location: 4857-5249 bp Feature: CDS Location: 5261-9658 bp Feature: CDS Location: 9643-10851 bp Feature: CDS Location: 10853-11362 bp Feature: CDS Location: 11389-15609 bp Feature: CDS Location: 29843-30331 bp Feature: CDS Location: 30344-30757 bp Feature: CDS Location: 30932-31201 bp Feature: CDS Location: 31198-31455 bp Feature: CDS Location: 31461-31760 bp Feature: CDS Location: 31813-32055 bp Feature: CDS Location: 32075-32404 bp Feature: CDS Location: 32385-33275 bp Feature: CDS Location: 33288-34130 bp Feature: CDS Location: 34136-34333 bp Feature: CDS Location: 34346-35509 bp Feature: CDS Location: 35530-35994 bp Feature: CDS Location: 36033-36296 bp Feature: CDS Location: 36296-36517 bp Feature: CDS Location: 36521-37126 bp Feature: CDS Location: 37137-37871 bp Feature: CDS Location: 37856-38650 bp Feature: CDS Location: 38726-39472 bp Feature: CDS Location: 39484-39777 bp Feature: CDS Location: 39791-40219 bp Feature: CDS Location: 40221-40604 bp Feature: target Des: target gene diversified by DGR Location: 40693-41178 bp Feature: CDS Location: 41175-41915 bp Feature: CDS Location: 41918-42811 bp Feature: CDS Location: 42825-43226 bp Feature: CDS Location: 43235-45226 bp Feature: CDS Location: 45280-45570 bp Feature: CDS Location: 45776-46165 bp Feature: CDS Location: 46167-46379 bp Feature: CDS Location: 46548-47045 bp Feature: CDS Location: 47370-47552 bp Feature: CDS Location: 47568-47852 bp Feature: CDS Location: 47860-48360 bp Feature: CDS Location: 48760-50070 bp Feature: CDS Location: 50125-50265 bp Sorry, your browser does not support inline SVG.