myDGR

myDGR report for SRS015217_WUGC_scaffold_19551

Seq: SRS015217_WUGC_scaffold_19551 (78591 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 27-14648 bp 2 Locus 2: 29325-51673 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 27-1424 bp Feature: CDS Location: 1538-2377 bp Feature: CDS Location: 2615-3079 bp Feature: CDS Location: 3268-3447 bp Feature: CDS Location: 3462-3599 bp Feature: target Des: target gene diversified by DGR Location: 3707-4744 bp Feature: CDS Location: 4871-5056 bp Feature: CDS Location: 5178-6251 bp Feature: CDS Location: 6184-6921 bp Feature: CDS Location: 6921-7244 bp Feature: CDS Location: 7250-7633 bp Feature: CDS Location: 7639-8211 bp Feature: CDS Location: 8211-8597 bp Feature: CDS Location: 8601-8885 bp Feature: CDS Location: 8897-9295 bp Feature: CDS Location: 9364-9660 bp Feature: CDS Location: 9653-10057 bp Feature: CDS Location: 10057-10353 bp Feature: CDS Location: 10555-11142 bp Feature: CDS Location: 11156-11359 bp Feature: CDS Location: 11501-11797 bp Feature: CDS Location: 11934-12293 bp Feature: CDS Location: 12425-13186 bp Feature: CDS Location: 13218-14648 bp Feature: CDS Location: 29325-29462 bp Feature: CDS Location: 29477-33121 bp Feature: CDS Location: 33114-33329 bp Feature: CDS Location: 33331-34629 bp Feature: CDS Location: 34629-34979 bp Feature: CDS Location: 34983-35384 bp Feature: CDS Location: 35391-35720 bp Feature: CDS Location: 35713-36855 bp Feature: CDS Location: 36848-37849 bp Feature: CDS Location: 37866-38177 bp Feature: CDS Location: 38181-38675 bp Feature: CDS Location: 38742-39200 bp Feature: target Des: target gene diversified by DGR Location: 39207-40259 bp Feature: accessory Des: Avd_like Location: 40340-40783 bp Feature: RT Des: DGR reverse transcriptase Location: 41213-42427 bp Feature: CDS Location: 42405-42854 bp Feature: CDS Location: 42873-43256 bp Feature: CDS Location: 43275-44693 bp Feature: CDS Location: 44713-45300 bp Feature: CDS Location: 45404-45721 bp Feature: CDS Location: 45763-46044 bp Feature: CDS Location: 46076-46300 bp Feature: CDS Location: 46439-46672 bp Feature: CDS Location: 46723-47019 bp Feature: CDS Location: 47195-47437 bp Feature: CDS Location: 47468-47596 bp Feature: CDS Location: 47888-48148 bp Feature: CDS Location: 48247-48468 bp Feature: CDS Location: 48455-50521 bp Feature: CDS Location: 50603-51673 bp Sorry, your browser does not support inline SVG.