myDGR

myDGR report for SRS017701_Baylor_scaffold_11281

Seq: SRS017701_Baylor_scaffold_11281 (49502 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 108-20390 bp 2 Locus 2: 33859-49500 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 108-365 bp Feature: CDS Location: 474-1781 bp Feature: CDS Location: 1781-2083 bp Feature: CDS Location: 2479-2904 bp Feature: CDS Location: 3091-3315 bp Feature: CDS Location: 3346-3909 bp Feature: CDS Location: 4080-4319 bp Feature: CDS Location: 4307-4717 bp Feature: CDS Location: 4935-5219 bp Feature: CDS Location: 5238-5918 bp Feature: CDS Location: 5920-7971 bp Feature: target Des: target gene diversified by DGR Location: 8004-8741 bp Feature: CDS Location: 8753-9580 bp Feature: CDS Location: 9583-10335 bp Feature: CDS Location: 10347-10742 bp Feature: target Des: target gene diversified by DGR Location: 10761-11309 bp Feature: CDS Location: 11306-11578 bp Feature: CDS Location: 11575-12423 bp Feature: CDS Location: 12499-12876 bp Feature: CDS Location: 12878-13276 bp Feature: CDS Location: 13170-13886 bp Feature: CDS Location: 13990-14598 bp Feature: CDS Location: 14613-14867 bp Feature: CDS Location: 15093-15521 bp Feature: CDS Location: 15543-15896 bp Feature: CDS Location: 15929-16216 bp Feature: CDS Location: 16341-16643 bp Feature: CDS Location: 16647-17159 bp Feature: CDS Location: 17156-17404 bp Feature: CDS Location: 17401-17631 bp Feature: CDS Location: 17642-17818 bp Feature: CDS Location: 17823-18179 bp Feature: CDS Location: 18169-18585 bp Feature: CDS Location: 18834-20390 bp Feature: CDS Location: 33859-34431 bp Feature: CDS Location: 34646-38836 bp Feature: CDS Location: 38846-39349 bp Feature: CDS Location: 39355-40572 bp Feature: CDS Location: 40557-44582 bp Feature: CDS Location: 44731-44991 bp Feature: target Des: target gene diversified by DGR Location: 45003-46337 bp Feature: accessory Des: PAG1 Location: 46381-46725 bp Feature: RT Des: DGR reverse transcriptase Location: 46982-47962 bp Feature: CDS Location: 47940-48311 bp Feature: CDS Location: 48313-48783 bp Feature: CDS Location: 48770-49345 bp Feature: CDS Location: 49342-49500 bp Sorry, your browser does not support inline SVG.