myDGR

myDGR report for SRS018817_WUGC_scaffold_11409

Seq: SRS018817_WUGC_scaffold_11409 (43604 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3-18535 bp Zoom in on locus 1 Feature: CDS Location: 3-146 bp Feature: CDS Location: 392-979 bp Feature: CDS Location: 972-1571 bp Feature: CDS Location: 1831-2445 bp Feature: CDS Location: 2521-3003 bp Feature: CDS Location: 3008-7024 bp Feature: accessory Des: PAG1 Location: 7030-7344 bp Feature: CDS Location: 7344-7721 bp Feature: RT Des: DGR reverse transcriptase Location: 7702-8742 bp Feature: CDS Location: 8860-9009 bp Feature: target Des: target gene diversified by DGR Location: 9040-10467 bp Feature: CDS Location: 10504-11265 bp Feature: CDS Location: 11267-12004 bp Feature: CDS Location: 11994-12962 bp Feature: CDS Location: 12959-17797 bp Feature: CDS Location: 17790-17993 bp Feature: CDS Location: 18002-18535 bp Sorry, your browser does not support inline SVG.