myDGR

myDGR report for SRS023583_Baylor_scaffold_6064

Seq: SRS023583_Baylor_scaffold_6064 (56071 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 267-17252 bp 2 Locus 2: 34794-55722 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 267-854 bp Feature: CDS Location: 847-1446 bp Feature: CDS Location: 1706-2320 bp Feature: CDS Location: 2409-3191 bp Feature: CDS Location: 4083-4355 bp Feature: CDS Location: 4361-4594 bp Feature: CDS Location: 4730-4927 bp Feature: CDS Location: 4931-5161 bp Feature: CDS Location: 5237-5410 bp Feature: CDS Location: 5417-5671 bp Feature: accessory Des: PAG1 Location: 5746-6060 bp Feature: CDS Location: 6060-6437 bp Feature: RT Des: DGR reverse transcriptase Location: 6418-7458 bp Feature: CDS Location: 7576-7725 bp Feature: target Des: target gene diversified by DGR Location: 7756-9183 bp Feature: CDS Location: 9221-9982 bp Feature: CDS Location: 9984-10721 bp Feature: CDS Location: 10711-11679 bp Feature: CDS Location: 11676-16514 bp Feature: CDS Location: 16507-16710 bp Feature: CDS Location: 16719-17252 bp Feature: CDS Location: 34794-36221 bp Feature: CDS Location: 36208-36708 bp Feature: CDS Location: 36780-37019 bp Feature: CDS Location: 37056-37667 bp Feature: CDS Location: 37645-38763 bp Feature: CDS Location: 38765-39175 bp Feature: CDS Location: 39202-39642 bp Feature: CDS Location: 39639-40031 bp Feature: CDS Location: 40036-40608 bp Feature: CDS Location: 40605-41417 bp Feature: CDS Location: 41547-41720 bp Feature: CDS Location: 41722-42177 bp Feature: CDS Location: 42179-42667 bp Feature: CDS Location: 42687-43250 bp Feature: CDS Location: 43247-43903 bp Feature: CDS Location: 43827-44729 bp Feature: CDS Location: 44671-45429 bp Feature: CDS Location: 45459-45887 bp Feature: CDS Location: 45884-46258 bp Feature: target Des: target gene diversified by DGR Location: 46255-46836 bp Feature: CDS Location: 46971-47408 bp Feature: CDS Location: 47398-47763 bp Feature: CDS Location: 47766-48500 bp Feature: CDS Location: 48500-49489 bp Feature: CDS Location: 49501-51495 bp Feature: CDS Location: 51492-51779 bp Feature: CDS Location: 52034-52585 bp Feature: CDS Location: 52587-52838 bp Feature: CDS Location: 53005-53487 bp Feature: CDS Location: 53520-53732 bp Feature: CDS Location: 53732-53989 bp Feature: CDS Location: 54379-55722 bp Sorry, your browser does not support inline SVG.