myDGR

myDGR report for SRS023914_Baylor_scaffold_20705

Seq: SRS023914_Baylor_scaffold_20705 (51149 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 2-17630 bp 2 Locus 2: 21531-42911 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 2-859 bp Feature: CDS Location: 856-1443 bp Feature: CDS Location: 1545-2852 bp Feature: CDS Location: 2910-3350 bp Feature: CDS Location: 3354-3752 bp Feature: CDS Location: 3765-4115 bp Feature: RT Des: DGR reverse transcriptase Location: 4245-5432 bp Feature: CDS Location: 5438-5602 bp Feature: accessory Des: Avd_like Location: 5699-6088 bp Feature: target Des: target gene diversified by DGR Location: 6166-6936 bp Feature: CDS Location: 6947-8410 bp Feature: CDS Location: 8413-9456 bp Feature: CDS Location: 9460-9897 bp Feature: CDS Location: 9913-11067 bp Feature: CDS Location: 11084-12751 bp Feature: CDS Location: 12758-15031 bp Feature: CDS Location: 15033-17630 bp Feature: CDS Location: 21531-22208 bp Feature: CDS Location: 22195-23451 bp Feature: CDS Location: 23633-23842 bp Feature: CDS Location: 23893-24246 bp Feature: CDS Location: 24307-24546 bp Feature: CDS Location: 24775-26481 bp Feature: CDS Location: 26610-26990 bp Feature: CDS Location: 27049-27504 bp Feature: CDS Location: 27508-27813 bp Feature: CDS Location: 27791-29182 bp Feature: CDS Location: 29184-29507 bp Feature: CDS Location: 29816-32248 bp Feature: CDS Location: 32436-32573 bp Feature: target Des: target gene diversified by DGR Location: 32637-33311 bp Feature: CDS Location: 33298-33642 bp Feature: CDS Location: 33653-35599 bp Feature: CDS Location: 35602-36060 bp Feature: CDS Location: 36113-36289 bp Feature: CDS Location: 36292-36852 bp Feature: CDS Location: 36874-37203 bp Feature: CDS Location: 37355-38503 bp Feature: CDS Location: 38507-39016 bp Feature: CDS Location: 39029-39265 bp Feature: CDS Location: 39472-39699 bp Feature: CDS Location: 39972-40379 bp Feature: CDS Location: 40376-40816 bp Feature: CDS Location: 40867-41490 bp Feature: CDS Location: 41909-42631 bp Feature: CDS Location: 42714-42911 bp Sorry, your browser does not support inline SVG.