myDGR

myDGR report for SRS056259_LANL_scaffold_48800

Seq: SRS056259_LANL_scaffold_48800 (50505 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 474-18247 bp 2 Locus 2: 30971-50331 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 474-1232 bp Feature: CDS Location: 1287-1778 bp Feature: CDS Location: 1775-3235 bp Feature: CDS Location: 3228-4070 bp Feature: CDS Location: 4075-5004 bp Feature: CDS Location: 5026-7095 bp Feature: RT Des: DGR reverse transcriptase Location: 7058-8092 bp Feature: CDS Location: 8233-8364 bp Feature: accessory Des: Avd_like Location: 8377-8745 bp Feature: target Des: target gene diversified by DGR Location: 8789-9550 bp Feature: CDS Location: 9573-10274 bp Feature: CDS Location: 10429-11262 bp Feature: CDS Location: 11279-12781 bp Feature: CDS Location: 12809-13471 bp Feature: CDS Location: 13636-14301 bp Feature: CDS Location: 14743-15036 bp Feature: CDS Location: 15038-15400 bp Feature: CDS Location: 15558-15812 bp Feature: CDS Location: 15836-16834 bp Feature: CDS Location: 17012-17788 bp Feature: CDS Location: 18065-18247 bp Feature: CDS Location: 30971-31222 bp Feature: CDS Location: 31225-31557 bp Feature: CDS Location: 31580-32035 bp Feature: CDS Location: 32262-32468 bp Feature: CDS Location: 32514-32927 bp Feature: CDS Location: 32976-33383 bp Feature: CDS Location: 33434-33835 bp Feature: CDS Location: 33876-34058 bp Feature: CDS Location: 34085-34312 bp Feature: CDS Location: 34340-34639 bp Feature: CDS Location: 34774-34962 bp Feature: CDS Location: 35072-35347 bp Feature: CDS Location: 35499-36275 bp Feature: CDS Location: 37521-37790 bp Feature: CDS Location: 37831-38835 bp Feature: CDS Location: 38854-39492 bp Feature: CDS Location: 39505-39726 bp Feature: CDS Location: 39743-40063 bp Feature: CDS Location: 40091-40330 bp Feature: CDS Location: 40366-40599 bp Feature: CDS Location: 40603-41118 bp Feature: target Des: target gene diversified by DGR Location: 41205-41819 bp Feature: CDS Location: 41885-42169 bp Feature: CDS Location: 42181-42495 bp Feature: CDS Location: 42508-42723 bp Feature: CDS Location: 42762-43520 bp Feature: CDS Location: 43629-43769 bp Feature: CDS Location: 43804-43953 bp Feature: CDS Location: 43994-44155 bp Feature: CDS Location: 44184-44534 bp Feature: CDS Location: 44581-44865 bp Feature: CDS Location: 44905-45099 bp Feature: CDS Location: 45139-45483 bp Feature: CDS Location: 45535-46086 bp Feature: CDS Location: 46106-46264 bp Feature: CDS Location: 46279-46407 bp Feature: CDS Location: 46423-47343 bp Feature: CDS Location: 47433-47624 bp Feature: CDS Location: 47640-47945 bp Feature: CDS Location: 47976-48242 bp Feature: CDS Location: 48263-48406 bp Feature: CDS Location: 48443-48649 bp Feature: CDS Location: 48702-49073 bp Feature: CDS Location: 49503-49667 bp Feature: CDS Location: 50128-50331 bp Sorry, your browser does not support inline SVG.