myDGR

myDGR report for LCQW01000004.1

Seq: LCQW01000004.1 (39845 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 2-21372 bp 2 Locus 2: 16200-36753 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 2-1198 bp Feature: CDS Location: 1227-3215 bp Feature: CDS Location: 3242-3829 bp Feature: CDS Location: 3832-6684 bp Feature: CDS Location: 6762-7418 bp Feature: CDS Location: 7488-9179 bp Feature: CDS Location: 9286-9543 bp Feature: CDS Location: 9552-9833 bp Feature: CDS Location: 9882-10304 bp Feature: RT Des: DGR reverse transcriptase Location: 10322-11551 bp Feature: CDS Location: 11625-11987 bp Feature: target Des: target gene diversified by DGR Location: 12193-12810 bp Feature: CDS Location: 12986-13531 bp Feature: CDS Location: 13535-13867 bp Feature: CDS Location: 13961-14122 bp Feature: CDS Location: 14124-14924 bp Feature: CDS Location: 14966-15277 bp Feature: CDS Location: 15217-15927 bp Feature: CDS Location: 15960-16181 bp Feature: CDS Location: 16200-16430 bp Feature: CDS Location: 16466-17500 bp Feature: CDS Location: 17556-18149 bp Feature: CDS Location: 18151-18960 bp Feature: CDS Location: 18966-19253 bp Feature: CDS Location: 19240-19407 bp Feature: CDS Location: 19618-20079 bp Feature: CDS Location: 20254-21372 bp Feature: CDS Location: 16200-16430 bp Feature: CDS Location: 16466-17500 bp Feature: CDS Location: 17556-18149 bp Feature: CDS Location: 18151-18960 bp Feature: CDS Location: 18966-19253 bp Feature: CDS Location: 19240-19407 bp Feature: CDS Location: 19618-20079 bp Feature: CDS Location: 20254-21372 bp Feature: CDS Location: 21369-21935 bp Feature: CDS Location: 21987-22598 bp Feature: CDS Location: 23218-25200 bp Feature: RT Des: DGR reverse transcriptase Location: 25166-26218 bp Feature: accessory Des: Avd_like Location: 26150-26500 bp Feature: CDS Location: 26693-26833 bp Feature: target Des: target gene diversified by DGR Location: 27110-27985 bp Feature: target Des: target gene diversified by DGR Location: 28048-30693 bp Feature: CDS Location: 30762-32816 bp Feature: CDS Location: 32803-34464 bp Feature: CDS Location: 34461-35057 bp Feature: CDS Location: 35170-36231 bp Feature: CDS Location: 36316-36537 bp Feature: CDS Location: 36541-36753 bp Sorry, your browser does not support inline SVG.