myDGR

myDGR report for SRS013951_WUGC_scaffold_69149

Seq: SRS013951_WUGC_scaffold_69149 (48927 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 19-12012 bp 2 Locus 2: 29730-48881 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 19-339 bp Feature: CDS Location: 359-1174 bp Feature: target Des: target gene diversified by DGR Location: 1304-2623 bp Feature: CDS Location: 2616-3350 bp Feature: CDS Location: 3356-4111 bp Feature: CDS Location: 4108-4359 bp Feature: CDS Location: 4331-4987 bp Feature: CDS Location: 4999-5829 bp Feature: CDS Location: 5822-6223 bp Feature: CDS Location: 6310-7176 bp Feature: CDS Location: 7173-7856 bp Feature: CDS Location: 7925-8254 bp Feature: CDS Location: 8266-8526 bp Feature: CDS Location: 8739-9248 bp Feature: CDS Location: 9245-9784 bp Feature: CDS Location: 9781-10389 bp Feature: CDS Location: 10386-10613 bp Feature: CDS Location: 10710-11063 bp Feature: CDS Location: 11118-11405 bp Feature: CDS Location: 11410-12012 bp Feature: CDS Location: 29730-30137 bp Feature: CDS Location: 30255-34046 bp Feature: CDS Location: 34039-34287 bp Feature: CDS Location: 34284-35201 bp Feature: CDS Location: 35201-35551 bp Feature: CDS Location: 35564-36250 bp Feature: CDS Location: 36263-36544 bp Feature: CDS Location: 36541-37887 bp Feature: CDS Location: 37902-38807 bp Feature: CDS Location: 38827-39138 bp Feature: CDS Location: 39159-39584 bp Feature: CDS Location: 39588-39956 bp Feature: target Des: target gene diversified by DGR Location: 39977-41074 bp Feature: accessory Des: Avd_like Location: 41146-41490 bp Feature: CDS Location: 41529-41660 bp Feature: RT Des: DGR reverse transcriptase Location: 41605-43062 bp Feature: CDS Location: 43041-43397 bp Feature: CDS Location: 43410-43790 bp Feature: CDS Location: 43802-45385 bp Feature: CDS Location: 45542-46069 bp Feature: CDS Location: 46135-46773 bp Feature: CDS Location: 46900-47148 bp Feature: CDS Location: 47515-47775 bp Feature: CDS Location: 47838-48881 bp Sorry, your browser does not support inline SVG.