myDGR

myDGR report for SRS014923_WUGC_scaffold_16003

Seq: SRS014923_WUGC_scaffold_16003 (58454 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 2-10349 bp 2 Locus 2: 27087-50775 bp Zoom in on locus 1 Zoom in on locus 2 Feature: target Des: target gene diversified by DGR Location: 2-721 bp Feature: CDS Location: 714-1448 bp Feature: CDS Location: 1454-2209 bp Feature: CDS Location: 2206-2457 bp Feature: CDS Location: 2429-3085 bp Feature: CDS Location: 3097-3927 bp Feature: CDS Location: 3920-4321 bp Feature: CDS Location: 4248-5267 bp Feature: CDS Location: 5264-5947 bp Feature: CDS Location: 5944-6834 bp Feature: CDS Location: 6831-7340 bp Feature: CDS Location: 7337-7876 bp Feature: CDS Location: 7873-8481 bp Feature: CDS Location: 8478-8705 bp Feature: CDS Location: 8864-9157 bp Feature: CDS Location: 9212-9499 bp Feature: CDS Location: 9551-10126 bp Feature: CDS Location: 10200-10349 bp Feature: CDS Location: 27087-27494 bp Feature: CDS Location: 27612-31403 bp Feature: CDS Location: 31396-31644 bp Feature: CDS Location: 31641-32558 bp Feature: CDS Location: 32558-32908 bp Feature: CDS Location: 32921-33607 bp Feature: CDS Location: 33620-33901 bp Feature: CDS Location: 33898-35244 bp Feature: CDS Location: 35259-36164 bp Feature: CDS Location: 36184-36495 bp Feature: CDS Location: 36516-36941 bp Feature: CDS Location: 36945-37313 bp Feature: target Des: target gene diversified by DGR Location: 37334-38428 bp Feature: accessory Des: Avd_like Location: 38500-38844 bp Feature: RT Des: DGR reverse transcriptase Location: 39104-40417 bp Feature: CDS Location: 40396-40752 bp Feature: CDS Location: 40765-41145 bp Feature: CDS Location: 41157-42740 bp Feature: CDS Location: 42897-43424 bp Feature: CDS Location: 43490-44128 bp Feature: CDS Location: 44228-44503 bp Feature: CDS Location: 44859-45119 bp Feature: CDS Location: 45183-46226 bp Feature: CDS Location: 46417-46839 bp Feature: CDS Location: 46942-47166 bp Feature: CDS Location: 47420-48130 bp Feature: CDS Location: 48163-48837 bp Feature: CDS Location: 48856-50775 bp Sorry, your browser does not support inline SVG.