myDGR

myDGR report for SRS014923_WUGC_scaffold_17878

Seq: SRS014923_WUGC_scaffold_17878 (45177 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 119-15573 bp 2 Locus 2: 29315-45151 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 119-823 bp Feature: CDS Location: 820-1395 bp Feature: CDS Location: 1382-1852 bp Feature: CDS Location: 1854-2225 bp Feature: RT Des: DGR reverse transcriptase Location: 2203-3237 bp Feature: accessory Des: PAG1 Location: 3494-3838 bp Feature: target Des: target gene diversified by DGR Location: 3882-5216 bp Feature: CDS Location: 5228-5488 bp Feature: CDS Location: 5637-9662 bp Feature: CDS Location: 9647-10864 bp Feature: CDS Location: 10870-11373 bp Feature: CDS Location: 11383-15573 bp Feature: CDS Location: 29315-29872 bp Feature: CDS Location: 29884-31440 bp Feature: CDS Location: 31689-32105 bp Feature: CDS Location: 32095-32451 bp Feature: CDS Location: 32456-32632 bp Feature: CDS Location: 32643-32873 bp Feature: CDS Location: 32870-33118 bp Feature: CDS Location: 33115-33627 bp Feature: CDS Location: 33631-34083 bp Feature: CDS Location: 34058-34345 bp Feature: CDS Location: 34378-34731 bp Feature: CDS Location: 34753-35181 bp Feature: CDS Location: 35407-35661 bp Feature: CDS Location: 35676-36284 bp Feature: CDS Location: 36388-37104 bp Feature: CDS Location: 36998-37858 bp Feature: CDS Location: 37904-38752 bp Feature: CDS Location: 38749-39021 bp Feature: target Des: target gene diversified by DGR Location: 39032-39628 bp Feature: CDS Location: 39647-40042 bp Feature: CDS Location: 40054-40806 bp Feature: CDS Location: 40809-41636 bp Feature: target Des: target gene diversified by DGR Location: 41648-42385 bp Feature: CDS Location: 42418-44469 bp Feature: CDS Location: 44471-45151 bp Sorry, your browser does not support inline SVG.