myDGR

myDGR report for SRS019161_WUGC_scaffold_35145

Seq: SRS019161_WUGC_scaffold_35145 (50584 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3-20694 bp 2 Locus 2: 34218-50456 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 3-500 bp Feature: CDS Location: 725-2032 bp Feature: CDS Location: 2032-2334 bp Feature: CDS Location: 2730-3155 bp Feature: CDS Location: 3342-3566 bp Feature: CDS Location: 3597-4160 bp Feature: CDS Location: 4331-4570 bp Feature: CDS Location: 4558-4968 bp Feature: CDS Location: 5186-5470 bp Feature: CDS Location: 5489-6169 bp Feature: CDS Location: 6171-8222 bp Feature: target Des: target gene diversified by DGR Location: 8255-8992 bp Feature: CDS Location: 9004-9831 bp Feature: CDS Location: 9834-10586 bp Feature: CDS Location: 10598-10993 bp Feature: target Des: target gene diversified by DGR Location: 11012-11560 bp Feature: CDS Location: 11557-11829 bp Feature: CDS Location: 11826-12674 bp Feature: CDS Location: 12750-13580 bp Feature: CDS Location: 13474-14190 bp Feature: CDS Location: 14294-14902 bp Feature: CDS Location: 14917-15171 bp Feature: CDS Location: 15182-15403 bp Feature: CDS Location: 15550-15825 bp Feature: CDS Location: 15847-16200 bp Feature: CDS Location: 16233-16520 bp Feature: CDS Location: 16645-16947 bp Feature: CDS Location: 16951-17463 bp Feature: CDS Location: 17460-17708 bp Feature: CDS Location: 17705-17935 bp Feature: CDS Location: 17946-18122 bp Feature: CDS Location: 18127-18483 bp Feature: CDS Location: 18473-18889 bp Feature: CDS Location: 19138-20694 bp Feature: CDS Location: 34218-34790 bp Feature: CDS Location: 35005-39195 bp Feature: CDS Location: 39205-39708 bp Feature: CDS Location: 39714-40931 bp Feature: CDS Location: 40916-44941 bp Feature: CDS Location: 45090-45350 bp Feature: target Des: target gene diversified by DGR Location: 45362-46696 bp Feature: accessory Des: PAG1 Location: 46740-47081 bp Feature: RT Des: DGR reverse transcriptase Location: 47338-48372 bp Feature: CDS Location: 48350-48721 bp Feature: CDS Location: 48723-49193 bp Feature: CDS Location: 49180-49755 bp Feature: CDS Location: 49752-50456 bp Sorry, your browser does not support inline SVG.