myDGR

myDGR report for SRS023346_LANL_scaffold_1239

Seq: SRS023346_LANL_scaffold_1239 (94594 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 7081-30555 bp 2 Locus 2: 61953-83142 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 7081-7539 bp Feature: CDS Location: 7560-9761 bp Feature: CDS Location: 9764-10327 bp Feature: CDS Location: 10336-10692 bp Feature: CDS Location: 10820-11038 bp Feature: CDS Location: 11064-11267 bp Feature: CDS Location: 11271-12770 bp Feature: CDS Location: 12771-13307 bp Feature: CDS Location: 13304-14191 bp Feature: CDS Location: 14188-15120 bp Feature: CDS Location: 15108-15740 bp Feature: CDS Location: 15762-17591 bp Feature: CDS Location: 17654-18007 bp Feature: RT Des: DGR reverse transcriptase Location: 17998-19419 bp Feature: accessory Des: AVD Location: 19432-19833 bp Feature: target Des: target gene diversified by DGR Location: 19963-25992 bp Feature: CDS Location: 26199-26459 bp Feature: CDS Location: 26462-28876 bp Feature: CDS Location: 28876-30555 bp Feature: CDS Location: 61953-62330 bp Feature: CDS Location: 62332-62565 bp Feature: CDS Location: 62570-63034 bp Feature: CDS Location: 63039-63743 bp Feature: CDS Location: 63761-63970 bp Feature: CDS Location: 63989-64591 bp Feature: CDS Location: 64611-64787 bp Feature: CDS Location: 64790-65140 bp Feature: CDS Location: 65146-65403 bp Feature: CDS Location: 65366-65968 bp Feature: CDS Location: 66051-66281 bp Feature: CDS Location: 66278-67546 bp Feature: CDS Location: 68570-69028 bp Feature: CDS Location: 69063-70052 bp Feature: CDS Location: 70104-71276 bp Feature: CDS Location: 71332-71514 bp Feature: CDS Location: 71650-71958 bp Feature: target Des: target gene diversified by DGR Location: 72249-72947 bp Feature: CDS Location: 73003-73254 bp Feature: CDS Location: 73270-73896 bp Feature: CDS Location: 73893-75530 bp Feature: CDS Location: 75546-75764 bp Feature: CDS Location: 75971-76666 bp Feature: CDS Location: 76912-77067 bp Feature: CDS Location: 77120-77398 bp Feature: CDS Location: 77475-77786 bp Feature: CDS Location: 77806-77991 bp Feature: CDS Location: 78001-78234 bp Feature: CDS Location: 78243-78632 bp Feature: CDS Location: 78651-78854 bp Feature: CDS Location: 78873-79010 bp Feature: CDS Location: 79032-79244 bp Feature: CDS Location: 79247-79657 bp Feature: CDS Location: 79662-79841 bp Feature: CDS Location: 79849-80274 bp Feature: CDS Location: 80380-80826 bp Feature: CDS Location: 80936-81175 bp Feature: CDS Location: 81183-81653 bp Feature: CDS Location: 81659-81922 bp Feature: CDS Location: 82031-82402 bp Feature: CDS Location: 82798-83142 bp Sorry, your browser does not support inline SVG.