myDGR

myDGR report for SRS024549_LANL_scaffold_4925

Seq: SRS024549_LANL_scaffold_4925 (44665 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3-11335 bp 2 Locus 2: 27817-44663 bp Zoom in on locus 1 Zoom in on locus 2 Feature: accessory Des: PAG1 Location: 3-305 bp Feature: RT Des: DGR reverse transcriptase Location: 500-1540 bp Feature: CDS Location: 1658-1807 bp Feature: target Des: target gene diversified by DGR Location: 1838-3265 bp Feature: CDS Location: 3304-4065 bp Feature: CDS Location: 4067-4804 bp Feature: CDS Location: 4794-5762 bp Feature: CDS Location: 5759-10597 bp Feature: CDS Location: 10590-10793 bp Feature: CDS Location: 10802-11335 bp Feature: CDS Location: 27817-29244 bp Feature: CDS Location: 29231-29698 bp Feature: CDS Location: 29802-30041 bp Feature: CDS Location: 30078-30689 bp Feature: CDS Location: 30667-31785 bp Feature: CDS Location: 31787-32206 bp Feature: CDS Location: 32224-32664 bp Feature: CDS Location: 32661-33053 bp Feature: CDS Location: 33058-33630 bp Feature: CDS Location: 33627-34439 bp Feature: CDS Location: 34579-34845 bp Feature: CDS Location: 34850-35305 bp Feature: CDS Location: 35307-35555 bp Feature: CDS Location: 35572-35796 bp Feature: CDS Location: 35816-36379 bp Feature: CDS Location: 36376-37032 bp Feature: CDS Location: 36956-37789 bp Feature: CDS Location: 37800-38558 bp Feature: CDS Location: 38588-39016 bp Feature: CDS Location: 39013-39387 bp Feature: target Des: target gene diversified by DGR Location: 39384-39965 bp Feature: CDS Location: 40085-40537 bp Feature: CDS Location: 40527-40892 bp Feature: CDS Location: 40895-41629 bp Feature: CDS Location: 41629-42618 bp Feature: CDS Location: 42630-44663 bp Sorry, your browser does not support inline SVG.