myDGR

myDGR report for SRS050422_LANL_scaffold_42845

Seq: SRS050422_LANL_scaffold_42845 (22331 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 2393-22328 bp Zoom in on locus 1 Feature: CDS Location: 2393-2875 bp Feature: CDS Location: 3130-3489 bp Feature: CDS Location: 3486-3869 bp Feature: CDS Location: 4050-6056 bp Feature: CDS Location: 6083-6226 bp Feature: CDS Location: 6364-6663 bp Feature: CDS Location: 6770-7921 bp Feature: CDS Location: 8041-8304 bp Feature: CDS Location: 8335-8553 bp Feature: CDS Location: 8722-9174 bp Feature: CDS Location: 9194-9448 bp Feature: CDS Location: 9507-9686 bp Feature: CDS Location: 9741-11528 bp Feature: CDS Location: 11532-11855 bp Feature: CDS Location: 11894-12157 bp Feature: RT Des: DGR reverse transcriptase Location: 12213-13340 bp Feature: accessory Des: Avd_like Location: 13695-14114 bp Feature: target Des: target gene diversified by DGR Location: 14184-15245 bp Feature: CDS Location: 15238-15597 bp Feature: CDS Location: 15767-16258 bp Feature: CDS Location: 16275-16607 bp Feature: CDS Location: 16625-17530 bp Feature: CDS Location: 17523-18680 bp Feature: CDS Location: 18673-18981 bp Feature: CDS Location: 18995-19384 bp Feature: CDS Location: 19402-19893 bp Feature: CDS Location: 19907-21172 bp Feature: CDS Location: 21176-21385 bp Feature: CDS Location: 21401-22168 bp Feature: CDS Location: 21831-22328 bp Sorry, your browser does not support inline SVG.