myDGR

myDGR report for SRS050752_LANL_scaffold_9299

Seq: SRS050752_LANL_scaffold_9299 (55506 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; genes next to RT

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 442-13839 bp 2 Locus 2: 35482-55344 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 442-1059 bp Feature: CDS Location: 1049-1645 bp Feature: CDS Location: 1642-2241 bp Feature: CDS Location: 2326-2619 bp Feature: CDS Location: 2616-3044 bp Feature: RT Des: DGR reverse transcriptase Location: 3007-4194 bp Feature: CDS Location: 4316-4453 bp Feature: target Des: target gene diversified by DGR Location: 4527-5888 bp Feature: CDS Location: 5898-6188 bp Feature: CDS Location: 6267-6752 bp Feature: CDS Location: 6757-12162 bp Feature: CDS Location: 12144-13328 bp Feature: CDS Location: 13330-13839 bp Feature: CDS Location: 35482-36912 bp Feature: CDS Location: 36899-37375 bp Feature: CDS Location: 37474-37713 bp Feature: CDS Location: 37746-38351 bp Feature: CDS Location: 38358-39473 bp Feature: CDS Location: 39463-39900 bp Feature: CDS Location: 39985-40425 bp Feature: CDS Location: 40425-40841 bp Feature: CDS Location: 40838-41095 bp Feature: CDS Location: 41097-42107 bp Feature: CDS Location: 42120-42296 bp Feature: CDS Location: 42460-43275 bp Feature: CDS Location: 43428-43898 bp Feature: CDS Location: 44166-44825 bp Feature: CDS Location: 44746-45561 bp Feature: CDS Location: 45609-46367 bp Feature: CDS Location: 46394-46837 bp Feature: target Des: target gene diversified by DGR Location: 46881-47084 bp Feature: target Des: target gene diversified by DGR Location: 47121-47558 bp Feature: CDS Location: 47690-48121 bp Feature: CDS Location: 48126-48854 bp Feature: CDS Location: 48861-49799 bp Feature: CDS Location: 49808-51769 bp Feature: CDS Location: 51771-52055 bp Feature: CDS Location: 52059-52271 bp Feature: CDS Location: 52286-52837 bp Feature: CDS Location: 52834-53079 bp Feature: CDS Location: 53224-53667 bp Feature: CDS Location: 53698-53898 bp Feature: CDS Location: 53895-54155 bp Feature: CDS Location: 54320-54562 bp Feature: CDS Location: 54817-55344 bp Sorry, your browser does not support inline SVG.