myDGR

myDGR report for SRS052697_LANL_scaffold_12111

Seq: SRS052697_LANL_scaffold_12111 (190369 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 28312-49559 bp 2 Locus 2: 78144-100903 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 28312-28965 bp Feature: CDS Location: 29441-29785 bp Feature: CDS Location: 29982-30113 bp Feature: CDS Location: 30181-30552 bp Feature: CDS Location: 30660-30923 bp Feature: CDS Location: 30929-31345 bp Feature: CDS Location: 31407-31646 bp Feature: CDS Location: 31756-32202 bp Feature: CDS Location: 32308-32733 bp Feature: CDS Location: 32917-33261 bp Feature: CDS Location: 33280-33483 bp Feature: CDS Location: 33502-33891 bp Feature: CDS Location: 33900-34133 bp Feature: CDS Location: 34143-34328 bp Feature: CDS Location: 34348-34659 bp Feature: CDS Location: 34736-35014 bp Feature: CDS Location: 35067-35453 bp Feature: CDS Location: 35466-36161 bp Feature: CDS Location: 36182-36358 bp Feature: CDS Location: 36368-36586 bp Feature: CDS Location: 36602-38239 bp Feature: CDS Location: 38236-38862 bp Feature: CDS Location: 38874-39125 bp Feature: target Des: target gene diversified by DGR Location: 39181-39879 bp Feature: CDS Location: 40171-40479 bp Feature: CDS Location: 40615-40797 bp Feature: CDS Location: 40853-42025 bp Feature: CDS Location: 42077-43066 bp Feature: CDS Location: 43101-43697 bp Feature: CDS Location: 44583-45851 bp Feature: CDS Location: 45848-46078 bp Feature: CDS Location: 46161-46763 bp Feature: CDS Location: 46726-46983 bp Feature: CDS Location: 46989-47339 bp Feature: CDS Location: 47342-47518 bp Feature: CDS Location: 47538-48140 bp Feature: CDS Location: 48159-48368 bp Feature: CDS Location: 48386-49090 bp Feature: CDS Location: 49095-49559 bp Feature: CDS Location: 78144-79184 bp Feature: CDS Location: 79187-80662 bp Feature: CDS Location: 80652-81566 bp Feature: CDS Location: 81566-83245 bp Feature: CDS Location: 83245-85659 bp Feature: CDS Location: 85662-85922 bp Feature: target Des: target gene diversified by DGR Location: 86129-92158 bp Feature: accessory Des: AVD Location: 92288-92689 bp Feature: RT Des: DGR reverse transcriptase Location: 92702-94123 bp Feature: CDS Location: 94114-94467 bp Feature: CDS Location: 94530-96359 bp Feature: CDS Location: 96381-97061 bp Feature: CDS Location: 97054-97986 bp Feature: CDS Location: 97983-98870 bp Feature: CDS Location: 98867-99403 bp Feature: CDS Location: 99404-100903 bp Sorry, your browser does not support inline SVG.