myDGR

myDGR report for SRS053335_LANL_scaffold_26347

Seq: SRS053335_LANL_scaffold_26347 (56195 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 107-16727 bp Zoom in on locus 1 Feature: CDS Location: 107-475 bp Feature: CDS Location: 526-768 bp Feature: CDS Location: 728-1468 bp Feature: CDS Location: 1503-1973 bp Feature: CDS Location: 2040-2294 bp Feature: CDS Location: 2410-3192 bp Feature: CDS Location: 3203-3511 bp Feature: CDS Location: 3527-3811 bp Feature: CDS Location: 3823-4179 bp Feature: CDS Location: 4307-4534 bp Feature: RT Des: DGR reverse transcriptase Location: 4540-5625 bp Feature: accessory Des: Avd_like Location: 5897-6241 bp Feature: target Des: target gene diversified by DGR Location: 6383-7465 bp Feature: CDS Location: 7472-7819 bp Feature: CDS Location: 7816-8334 bp Feature: CDS Location: 8346-8648 bp Feature: CDS Location: 8648-9664 bp Feature: CDS Location: 9657-10766 bp Feature: CDS Location: 10770-11189 bp Feature: CDS Location: 11194-11613 bp Feature: CDS Location: 11626-12600 bp Feature: CDS Location: 12611-13270 bp Feature: CDS Location: 13260-16727 bp Sorry, your browser does not support inline SVG.