myDGR

myDGR report for SRS055982_Baylor_scaffold_3547

Seq: SRS055982_Baylor_scaffold_3547 (57751 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 2-18779 bp 2 Locus 2: 37998-57414 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 2-1012 bp Feature: CDS Location: 1044-1313 bp Feature: CDS Location: 1310-2140 bp Feature: CDS Location: 2152-2493 bp Feature: CDS Location: 2733-2942 bp Feature: CDS Location: 2947-3465 bp Feature: CDS Location: 2954-3202 bp Feature: CDS Location: 3473-3712 bp Feature: CDS Location: 3731-5716 bp Feature: CDS Location: 5888-6031 bp Feature: CDS Location: 6052-6966 bp Feature: CDS Location: 6984-7721 bp Feature: CDS Location: 7621-7896 bp Feature: target Des: target gene diversified by DGR Location: 8112-8894 bp Feature: CDS Location: 8895-9650 bp Feature: CDS Location: 9562-10233 bp Feature: CDS Location: 10344-10694 bp Feature: CDS Location: 10703-10894 bp Feature: CDS Location: 10897-11184 bp Feature: CDS Location: 11207-11455 bp Feature: CDS Location: 11458-11718 bp Feature: CDS Location: 11725-13212 bp Feature: CDS Location: 13217-13414 bp Feature: CDS Location: 13420-13869 bp Feature: CDS Location: 13874-14035 bp Feature: CDS Location: 14039-14314 bp Feature: CDS Location: 14311-14622 bp Feature: CDS Location: 14627-15478 bp Feature: CDS Location: 15475-16263 bp Feature: CDS Location: 15490-15702 bp Feature: CDS Location: 16260-16748 bp Feature: CDS Location: 16928-17212 bp Feature: CDS Location: 17231-17656 bp Feature: CDS Location: 17653-17865 bp Feature: CDS Location: 17918-18091 bp Feature: CDS Location: 18108-18779 bp Feature: CDS Location: 37998-38486 bp Feature: CDS Location: 38491-38898 bp Feature: CDS Location: 38903-39430 bp Feature: CDS Location: 39440-40111 bp Feature: CDS Location: 40207-40344 bp Feature: CDS Location: 40341-44675 bp Feature: CDS Location: 44676-45164 bp Feature: CDS Location: 45158-46132 bp Feature: CDS Location: 46145-46807 bp Feature: CDS Location: 46823-47140 bp Feature: target Des: target gene diversified by DGR Location: 47292-48719 bp Feature: accessory Des: PAG1 Location: 48763-49110 bp Feature: RT Des: DGR reverse transcriptase Location: 49224-50429 bp Feature: CDS Location: 50395-50811 bp Feature: CDS Location: 50821-53787 bp Feature: CDS Location: 53856-54530 bp Feature: CDS Location: 54543-54815 bp Feature: CDS Location: 54812-55270 bp Feature: CDS Location: 55267-55755 bp Feature: CDS Location: 56046-56903 bp Feature: CDS Location: 56917-57414 bp Sorry, your browser does not support inline SVG.