myDGR

myDGR report for SRS056259_LANL_scaffold_58167

Seq: SRS056259_LANL_scaffold_58167 (39728 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 95-10414 bp 2 Locus 2: 23369-39610 bp Zoom in on locus 1 Zoom in on locus 2 Feature: target Des: target gene diversified by DGR Location: 95-697 bp Feature: CDS Location: 708-980 bp Feature: CDS Location: 977-1825 bp Feature: CDS Location: 1871-2731 bp Feature: CDS Location: 2625-3341 bp Feature: CDS Location: 3445-4053 bp Feature: CDS Location: 4068-4322 bp Feature: CDS Location: 4548-4976 bp Feature: CDS Location: 4998-5351 bp Feature: CDS Location: 5384-5671 bp Feature: CDS Location: 5646-6098 bp Feature: CDS Location: 6102-6614 bp Feature: CDS Location: 6611-6859 bp Feature: CDS Location: 6856-7086 bp Feature: CDS Location: 7097-7273 bp Feature: CDS Location: 7278-7634 bp Feature: CDS Location: 7624-8040 bp Feature: CDS Location: 8289-9845 bp Feature: CDS Location: 9857-10414 bp Feature: CDS Location: 23369-23941 bp Feature: CDS Location: 24156-28346 bp Feature: CDS Location: 28356-28859 bp Feature: CDS Location: 28865-30082 bp Feature: CDS Location: 30067-34092 bp Feature: CDS Location: 34241-34501 bp Feature: target Des: target gene diversified by DGR Location: 34513-35847 bp Feature: accessory Des: PAG1 Location: 35891-36235 bp Feature: RT Des: DGR reverse transcriptase Location: 36492-37526 bp Feature: CDS Location: 37504-37875 bp Feature: CDS Location: 37877-38347 bp Feature: CDS Location: 38334-38909 bp Feature: CDS Location: 38906-39610 bp Sorry, your browser does not support inline SVG.