myDGR

myDGR report for SRS064276_LANL_scaffold_12382

Seq: SRS064276_LANL_scaffold_12382 (47278 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 2-12482 bp 2 Locus 2: 28876-47089 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 2-280 bp Feature: CDS Location: 268-960 bp Feature: CDS Location: 980-1522 bp Feature: target Des: target gene diversified by DGR Location: 1528-2907 bp Feature: target Des: target gene diversified by DGR Location: 1528-2907 bp Feature: CDS Location: 2968-3102 bp Feature: CDS Location: 3116-3781 bp Feature: CDS Location: 3768-4367 bp Feature: CDS Location: 4364-5188 bp Feature: CDS Location: 5208-5402 bp Feature: CDS Location: 5551-6411 bp Feature: CDS Location: 6429-6704 bp Feature: CDS Location: 6707-7273 bp Feature: CDS Location: 7270-7767 bp Feature: CDS Location: 7772-7987 bp Feature: CDS Location: 7984-8613 bp Feature: CDS Location: 8624-9121 bp Feature: CDS Location: 9329-9646 bp Feature: CDS Location: 9685-9882 bp Feature: CDS Location: 9879-10136 bp Feature: CDS Location: 10139-10399 bp Feature: CDS Location: 10371-10712 bp Feature: CDS Location: 11013-11348 bp Feature: CDS Location: 11466-12482 bp Feature: CDS Location: 28876-29532 bp Feature: CDS Location: 29660-33277 bp Feature: CDS Location: 33291-33503 bp Feature: CDS Location: 33496-34872 bp Feature: CDS Location: 34885-35847 bp Feature: CDS Location: 35859-36251 bp Feature: CDS Location: 36264-36578 bp Feature: CDS Location: 36625-37719 bp Feature: CDS Location: 37712-38530 bp Feature: CDS Location: 38520-38702 bp Feature: CDS Location: 38730-39041 bp Feature: CDS Location: 39061-39513 bp Feature: CDS Location: 39529-39906 bp Feature: target Des: target gene diversified by DGR Location: 39924-41003 bp Feature: accessory Des: Avd_like Location: 41184-41570 bp Feature: RT Des: DGR reverse transcriptase Location: 41897-43057 bp Feature: CDS Location: 43081-43269 bp Feature: CDS Location: 43238-43546 bp Feature: CDS Location: 43627-43887 bp Feature: CDS Location: 43952-45436 bp Feature: CDS Location: 45463-45837 bp Feature: CDS Location: 46019-47089 bp Sorry, your browser does not support inline SVG.