myDGR

myDGR report for SRS077730_LANL_scaffold_4938

Seq: SRS077730_LANL_scaffold_4938 (38553 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 23666-38511 bp Zoom in on locus 1 Feature: CDS Location: 23666-23827 bp Feature: CDS Location: 24069-27200 bp Feature: CDS Location: 27214-27852 bp Feature: CDS Location: 27849-28847 bp Feature: CDS Location: 28860-29162 bp Feature: CDS Location: 29165-29599 bp Feature: CDS Location: 29612-30679 bp Feature: CDS Location: 30667-31536 bp Feature: CDS Location: 31538-31819 bp Feature: CDS Location: 31835-32326 bp Feature: CDS Location: 32326-32679 bp Feature: target Des: target gene diversified by DGR Location: 32672-33718 bp Feature: accessory Des: Avd_like Location: 33882-34286 bp Feature: RT Des: DGR reverse transcriptase Location: 34700-35710 bp Feature: CDS Location: 35747-36319 bp Feature: CDS Location: 36322-37251 bp Feature: CDS Location: 37262-37531 bp Feature: CDS Location: 37680-37841 bp Feature: CDS Location: 37903-38271 bp Feature: CDS Location: 38368-38511 bp Sorry, your browser does not support inline SVG.