myDGR

myDGR report for CAPH01000015.1

Seq: CAPH01000015.1 (58304 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 93-15945 bp 2 Locus 2: 33749-54997 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 93-383 bp Feature: CDS Location: 540-1706 bp Feature: CDS Location: 1952-2428 bp Feature: CDS Location: 2475-2897 bp Feature: CDS Location: 3058-3276 bp Feature: CDS Location: 3363-3536 bp Feature: CDS Location: 3554-3793 bp Feature: CDS Location: 3790-4026 bp Feature: CDS Location: 4019-4351 bp Feature: CDS Location: 4355-4621 bp Feature: CDS Location: 4769-5659 bp Feature: target Des: target gene diversified by DGR Location: 5690-6271 bp Feature: CDS Location: 6613-7551 bp Feature: CDS Location: 7557-7721 bp Feature: CDS Location: 7946-9325 bp Feature: CDS Location: 9330-10280 bp Feature: CDS Location: 10277-12097 bp Feature: CDS Location: 12102-13052 bp Feature: CDS Location: 13066-13554 bp Feature: CDS Location: 13556-13933 bp Feature: CDS Location: 13937-14263 bp Feature: CDS Location: 14269-15945 bp Feature: CDS Location: 33749-34195 bp Feature: CDS Location: 34195-34608 bp Feature: CDS Location: 34632-35093 bp Feature: CDS Location: 35241-35774 bp Feature: CDS Location: 35828-35980 bp Feature: CDS Location: 35980-40788 bp Feature: CDS Location: 40792-41289 bp Feature: CDS Location: 41286-42212 bp Feature: CDS Location: 42217-43047 bp Feature: target Des: target gene diversified by DGR Location: 43061-44494 bp Feature: RT Des: DGR reverse transcriptase Location: 44768-45802 bp Feature: CDS Location: 45789-46172 bp Feature: accessory Des: PAG1 Location: 46174-46488 bp Feature: CDS Location: 46488-49562 bp Feature: CDS Location: 49633-50307 bp Feature: CDS Location: 50319-50777 bp Feature: CDS Location: 50871-51284 bp Feature: CDS Location: 51283-51768 bp Feature: CDS Location: 52055-52516 bp Feature: CDS Location: 52518-53264 bp Feature: CDS Location: 53375-53506 bp Feature: CDS Location: 53807-53938 bp Feature: CDS Location: 54011-54178 bp Feature: CDS Location: 54413-54997 bp Sorry, your browser does not support inline SVG.